Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
POLR2J3Q9H1A7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 AC004817.3-201ENST00000602957 2129 ntBASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 ATP5G2P1-201ENST00000433580 426 ntBASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 KRT16P4-201ENST00000453883 522 ntBASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 AP000867.3-201ENST00000524675 377 ntBASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 KRT8P49-201ENST00000604166 1432 ntBASIC15.59■□□□□ 0.09
POLR2J3Q9H1A7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
POLR2J3Q9H1A7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
POLR2J3Q9H1A7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
POLR2J3Q9H1A7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
POLR2J3Q9H1A7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
POLR2J3Q9H1A7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
POLR2J3Q9H1A7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.09
POLR2J3Q9H1A7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 AC013467.2-201ENST00000605472 835 ntBASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.58■□□□□ 0.08
POLR2J3Q9H1A7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 AC022188.1-201ENST00000620960 1664 ntBASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms