Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTFDC1Q9BY42 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 INE1-201ENST00000456273 945 ntBASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTFDC1Q9BY42 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 AL133373.2-201ENST00000623187 2828 ntBASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 AC079776.1-201ENST00000401540 1152 ntBASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 HILS1-202ENST00000545329 423 ntBASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 AC124947.2-201ENST00000547118 1133 ntBASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 AL162274.1-201ENST00000617191 1098 ntBASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 PP12613-201ENST00000424958 2230 ntBASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 LINC02012-201ENST00000608206 1725 ntBASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RTFDC1Q9BY42 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 AC006277.1-201ENST00000624348 1610 ntBASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 AC087499.6-201ENST00000411576 835 ntBASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 RNA5SP410-201ENST00000516285 106 ntBASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 AL512361.1-201ENST00000554200 418 ntBASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 CHCHD2P3-201ENST00000603038 451 ntBASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTFDC1Q9BY42 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms