Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.8■□□□□ 0.44
RAD9AQ99638 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD9AQ99638 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.8■□□□□ 0.44
RAD9AQ99638 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD9AQ99638 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD9AQ99638 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RAD9AQ99638 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAD9AQ99638 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
RAD9AQ99638 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD9AQ99638 AC112492.5-201ENST00000421897 457 ntBASIC17.8■□□□□ 0.44
RAD9AQ99638 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.8■□□□□ 0.44
RAD9AQ99638 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD9AQ99638 SLC25A6P5-201ENST00000435663 894 ntBASIC17.8■□□□□ 0.44
RAD9AQ99638 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAD9AQ99638 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.8■□□□□ 0.44
RAD9AQ99638 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 RN7SL618P-201ENST00000477850 296 ntBASIC17.8■□□□□ 0.44
RAD9AQ99638 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAD9AQ99638 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RAD9AQ99638 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RAD9AQ99638 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD9AQ99638 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAD9AQ99638 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAD9AQ99638 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
RAD9AQ99638 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD9AQ99638 AL023806.1-201ENST00000603994 1649 ntBASIC17.8■□□□□ 0.44
RAD9AQ99638 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.79■□□□□ 0.44
RAD9AQ99638 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.79■□□□□ 0.44
RAD9AQ99638 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD9AQ99638 AC009113.1-201ENST00000570267 2443 ntBASIC17.79■□□□□ 0.44
RAD9AQ99638 AC104581.1-202ENST00000635932 2618 ntBASIC17.79■□□□□ 0.44
RAD9AQ99638 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.79■□□□□ 0.44
RAD9AQ99638 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.79■□□□□ 0.44
RAD9AQ99638 MIR658-201ENST00000385210 100 ntBASIC17.79■□□□□ 0.44
RAD9AQ99638 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RAD9AQ99638 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 SLC25A1P3-201ENST00000395415 828 ntBASIC17.79■□□□□ 0.44
RAD9AQ99638 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
RAD9AQ99638 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.79■□□□□ 0.44
RAD9AQ99638 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD9AQ99638 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.79■□□□□ 0.44
RAD9AQ99638 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.79■□□□□ 0.44
RAD9AQ99638 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD9AQ99638 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.79■□□□□ 0.44
RAD9AQ99638 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.79■□□□□ 0.44
RAD9AQ99638 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.79■□□□□ 0.44
RAD9AQ99638 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.79■□□□□ 0.44
RAD9AQ99638 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RAD9AQ99638 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.79■□□□□ 0.44
RAD9AQ99638 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD9AQ99638 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD9AQ99638 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD9AQ99638 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD9AQ99638 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RAD9AQ99638 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RAD9AQ99638 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RAD9AQ99638 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD9AQ99638 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD9AQ99638 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RAD9AQ99638 AC135050.7-201ENST00000624508 2218 ntBASIC17.78■□□□□ 0.44
RAD9AQ99638 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD9AQ99638 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD9AQ99638 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD9AQ99638 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RAD9AQ99638 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.78■□□□□ 0.44
RAD9AQ99638 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.78■□□□□ 0.44
RAD9AQ99638 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.78■□□□□ 0.44
RAD9AQ99638 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.78■□□□□ 0.44
RAD9AQ99638 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.78■□□□□ 0.44
RAD9AQ99638 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.78■□□□□ 0.44
RAD9AQ99638 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RAD9AQ99638 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms