Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC27.29■■□□□ 1.96
IFT140Q96RY7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC27.28■■□□□ 1.96
IFT140Q96RY7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
IFT140Q96RY7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
IFT140Q96RY7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
IFT140Q96RY7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
IFT140Q96RY7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
IFT140Q96RY7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
IFT140Q96RY7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC27.28■■□□□ 1.96
IFT140Q96RY7 AC124283.3-201ENST00000570869 594 ntBASIC27.28■■□□□ 1.96
IFT140Q96RY7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
IFT140Q96RY7 AC020765.3-201ENST00000613051 740 ntBASIC27.28■■□□□ 1.96
IFT140Q96RY7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
IFT140Q96RY7 AC016396.2-201ENST00000562575 1417 ntBASIC27.28■■□□□ 1.96
IFT140Q96RY7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
IFT140Q96RY7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
IFT140Q96RY7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC27.28■■□□□ 1.96
IFT140Q96RY7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
IFT140Q96RY7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
IFT140Q96RY7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC27.27■■□□□ 1.96
IFT140Q96RY7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
IFT140Q96RY7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
IFT140Q96RY7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
IFT140Q96RY7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
IFT140Q96RY7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC27.27■■□□□ 1.96
IFT140Q96RY7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
IFT140Q96RY7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC27.27■■□□□ 1.96
IFT140Q96RY7 AC010328.2-201ENST00000597698 1111 ntBASIC27.27■■□□□ 1.96
IFT140Q96RY7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
IFT140Q96RY7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
IFT140Q96RY7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC27.27■■□□□ 1.96
IFT140Q96RY7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
IFT140Q96RY7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC27.27■■□□□ 1.96
IFT140Q96RY7 Z97205.2-201ENST00000564697 1639 ntBASIC27.26■■□□□ 1.96
IFT140Q96RY7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
IFT140Q96RY7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
IFT140Q96RY7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC27.26■■□□□ 1.96
IFT140Q96RY7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
IFT140Q96RY7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
IFT140Q96RY7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
IFT140Q96RY7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC27.26■■□□□ 1.95
IFT140Q96RY7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC27.26■■□□□ 1.95
IFT140Q96RY7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC27.26■■□□□ 1.95
IFT140Q96RY7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC27.26■■□□□ 1.95
IFT140Q96RY7 KRT90P-201ENST00000549264 1064 ntBASIC27.26■■□□□ 1.95
IFT140Q96RY7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
IFT140Q96RY7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
IFT140Q96RY7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
IFT140Q96RY7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
IFT140Q96RY7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
IFT140Q96RY7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC27.26■■□□□ 1.95
IFT140Q96RY7 AC006277.1-201ENST00000624348 1610 ntBASIC27.26■■□□□ 1.95
IFT140Q96RY7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
IFT140Q96RY7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC27.26■■□□□ 1.95
IFT140Q96RY7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
IFT140Q96RY7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 RN7SL560P-201ENST00000577943 264 ntBASIC27.25■■□□□ 1.95
IFT140Q96RY7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 AC133539.2-201ENST00000604757 467 ntBASIC27.25■■□□□ 1.95
IFT140Q96RY7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
IFT140Q96RY7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
IFT140Q96RY7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
IFT140Q96RY7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 KRT8P39-201ENST00000396270 1433 ntBASIC27.25■■□□□ 1.95
IFT140Q96RY7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
IFT140Q96RY7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
IFT140Q96RY7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
IFT140Q96RY7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
IFT140Q96RY7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 FTH1P14-201ENST00000482930 551 ntBASIC27.25■■□□□ 1.95
IFT140Q96RY7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC27.25■■□□□ 1.95
IFT140Q96RY7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
IFT140Q96RY7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
IFT140Q96RY7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
IFT140Q96RY7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
IFT140Q96RY7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 SLC25A24P2-201ENST00000415059 510 ntBASIC27.24■■□□□ 1.95
IFT140Q96RY7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms