Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 NOC2LP1-202ENST00000452600 2235 ntBASIC20.33■□□□□ 0.84
CRAMP1Q96RY5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 AP006294.1-201ENST00000415407 339 ntBASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 AC044860.1-202ENST00000559481 777 ntBASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CRAMP1Q96RY5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 AC093724.1-201ENST00000448659 1027 ntBASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 AC024267.1-201ENST00000582320 895 ntBASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 AC134043.2-201ENST00000624206 2238 ntBASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 AC092053.1-201ENST00000605787 1936 ntBASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CRAMP1Q96RY5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 AL512384.1-201ENST00000406683 331 ntBASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 SPDYE17-201ENST00000412399 783 ntBASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 RN7SL752P-201ENST00000463779 287 ntBASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 HILS1-202ENST00000545329 423 ntBASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 AL162274.1-201ENST00000617191 1098 ntBASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 AL139011.1-202ENST00000642063 584 ntBASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 KRT8P12-202ENST00000472924 1397 ntBASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 AL023806.1-201ENST00000603994 1649 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms