Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SNRNP40Q96DI7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 ATP5G2P4-201ENST00000442175 420 ntBASIC15.05■□□□□ -0
SNRNP40Q96DI7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 AC133963.1-201ENST00000504166 1679 ntBASIC15.05■□□□□ -0
SNRNP40Q96DI7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 AL354751.1-201ENST00000412768 1863 ntBASIC15.05■□□□□ -0
SNRNP40Q96DI7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 LINC00896-202ENST00000609602 2128 ntBASIC15.05■□□□□ -0
SNRNP40Q96DI7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SNRNP40Q96DI7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
SNRNP40Q96DI7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 AL035456.1-201ENST00000456064 1369 ntBASIC15.04■□□□□ -0
SNRNP40Q96DI7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 AC009477.1-201ENST00000452936 217 ntBASIC15.04■□□□□ -0
SNRNP40Q96DI7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 TP53TG3HP-202ENST00000569755 579 ntBASIC15.04■□□□□ -0
SNRNP40Q96DI7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 CYP2A7P1-201ENST00000595391 815 ntBASIC15.04■□□□□ -0
SNRNP40Q96DI7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.04■□□□□ -0
SNRNP40Q96DI7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SNRNP40Q96DI7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.04■□□□□ -0
SNRNP40Q96DI7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 AC007541.1-201ENST00000570282 1469 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms