Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 CROCCP1-201ENST00000426910 5675 ntBASIC17.84■□□□□ 0.45
RNF135Q8IUD6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 AL158211.3-201ENST00000607385 239 ntBASIC17.84■□□□□ 0.45
RNF135Q8IUD6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF135Q8IUD6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RNF135Q8IUD6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNF135Q8IUD6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF135Q8IUD6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF135Q8IUD6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNF135Q8IUD6 AC009336.1-201ENST00000608941 1553 ntBASIC17.83■□□□□ 0.45
RNF135Q8IUD6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.83■□□□□ 0.45
RNF135Q8IUD6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNF135Q8IUD6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNF135Q8IUD6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF135Q8IUD6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF135Q8IUD6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 SERBP1P5-201ENST00000510079 1181 ntBASIC17.83■□□□□ 0.44
RNF135Q8IUD6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF135Q8IUD6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 LINC00304-203ENST00000565008 1864 ntBASIC17.82■□□□□ 0.44
RNF135Q8IUD6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 PIN1P1-201ENST00000412108 996 ntBASIC17.82■□□□□ 0.44
RNF135Q8IUD6 ARSEP1-201ENST00000420443 635 ntBASIC17.82■□□□□ 0.44
RNF135Q8IUD6 AC140658.5-201ENST00000438532 169 ntBASIC17.82■□□□□ 0.44
RNF135Q8IUD6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 AC097493.3-201ENST00000509725 367 ntBASIC17.82■□□□□ 0.44
RNF135Q8IUD6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF135Q8IUD6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF135Q8IUD6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms