Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 LINC02012-201ENST00000608206 1725 ntBASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD3Q6PCD5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 RPSAP43-201ENST00000402237 625 ntBASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 UPF3AP3-201ENST00000420996 769 ntBASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 AC112482.1-201ENST00000492080 688 ntBASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 GPALPP1-207ENST00000611650 899 ntBASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 AC139530.3-201ENST00000620344 690 ntBASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 REXO1L3P-201ENST00000622202 1288 ntBASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD3Q6PCD5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 MIR1233-2-201ENST00000408138 82 ntBASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 MIR1233-1-201ENST00000408722 82 ntBASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 GPX1P2-201ENST00000429271 606 ntBASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 MTDHP5-201ENST00000598980 586 ntBASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 AC023141.13-201ENST00000604991 943 ntBASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD3Q6PCD5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.52■□□□□ 0.4
RFWD3Q6PCD5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms