Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL10A1Q03692 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
COL10A1Q03692 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.23□□□□□ -0.13
COL10A1Q03692 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.23□□□□□ -0.13
COL10A1Q03692 AC078925.2-201ENST00000624013 1973 ntBASIC14.23□□□□□ -0.13
COL10A1Q03692 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.23□□□□□ -0.13
COL10A1Q03692 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
COL10A1Q03692 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
COL10A1Q03692 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.23□□□□□ -0.13
COL10A1Q03692 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
COL10A1Q03692 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 AP002490.2-201ENST00000524791 560 ntBASIC14.23□□□□□ -0.13
COL10A1Q03692 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.23□□□□□ -0.13
COL10A1Q03692 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.23□□□□□ -0.13
COL10A1Q03692 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.23□□□□□ -0.13
COL10A1Q03692 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.23□□□□□ -0.13
COL10A1Q03692 GPALPP1-207ENST00000611650 899 ntBASIC14.23□□□□□ -0.13
COL10A1Q03692 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
COL10A1Q03692 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.23□□□□□ -0.13
COL10A1Q03692 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
COL10A1Q03692 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL10A1Q03692 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COL10A1Q03692 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.22□□□□□ -0.13
COL10A1Q03692 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL10A1Q03692 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL10A1Q03692 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL10A1Q03692 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.22□□□□□ -0.13
COL10A1Q03692 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.22□□□□□ -0.13
COL10A1Q03692 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL10A1Q03692 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL10A1Q03692 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL10A1Q03692 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
COL10A1Q03692 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL10A1Q03692 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL10A1Q03692 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.22□□□□□ -0.13
COL10A1Q03692 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.22□□□□□ -0.13
COL10A1Q03692 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
COL10A1Q03692 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL10A1Q03692 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL10A1Q03692 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL10A1Q03692 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
COL10A1Q03692 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
COL10A1Q03692 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL10A1Q03692 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.22□□□□□ -0.13
COL10A1Q03692 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.22□□□□□ -0.13
COL10A1Q03692 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.22□□□□□ -0.13
COL10A1Q03692 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.22□□□□□ -0.13
COL10A1Q03692 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.22□□□□□ -0.13
COL10A1Q03692 KRT18P67-201ENST00000432816 1264 ntBASIC14.22□□□□□ -0.13
COL10A1Q03692 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
COL10A1Q03692 FAAHP1-202ENST00000446499 1238 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms