Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.94■□□□□ 0.62
USP11P51784 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
USP11P51784 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.94■□□□□ 0.62
USP11P51784 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.94■□□□□ 0.62
USP11P51784 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.94■□□□□ 0.62
USP11P51784 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.94■□□□□ 0.62
USP11P51784 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.94■□□□□ 0.62
USP11P51784 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
USP11P51784 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.94■□□□□ 0.62
USP11P51784 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
USP11P51784 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
USP11P51784 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
USP11P51784 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.94■□□□□ 0.62
USP11P51784 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.94■□□□□ 0.62
USP11P51784 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
USP11P51784 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.93■□□□□ 0.62
USP11P51784 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.93■□□□□ 0.62
USP11P51784 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.93■□□□□ 0.62
USP11P51784 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.93■□□□□ 0.62
USP11P51784 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
USP11P51784 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
USP11P51784 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.93■□□□□ 0.62
USP11P51784 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.93■□□□□ 0.62
USP11P51784 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.93■□□□□ 0.62
USP11P51784 FAM86C2P-203ENST00000528684 1004 ntBASIC18.93■□□□□ 0.62
USP11P51784 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.93■□□□□ 0.62
USP11P51784 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
USP11P51784 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.93■□□□□ 0.62
USP11P51784 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
USP11P51784 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.93■□□□□ 0.62
USP11P51784 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
USP11P51784 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
USP11P51784 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
USP11P51784 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.93■□□□□ 0.62
USP11P51784 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP11P51784 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.92■□□□□ 0.62
USP11P51784 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.92■□□□□ 0.62
USP11P51784 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.92■□□□□ 0.62
USP11P51784 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.92■□□□□ 0.62
USP11P51784 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.92■□□□□ 0.62
USP11P51784 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.92■□□□□ 0.62
USP11P51784 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
USP11P51784 AL671277.1-201ENST00000429656 993 ntBASIC18.92■□□□□ 0.62
USP11P51784 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.92■□□□□ 0.62
USP11P51784 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
USP11P51784 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.92■□□□□ 0.62
USP11P51784 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.92■□□□□ 0.62
USP11P51784 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.92■□□□□ 0.62
USP11P51784 MIR4469-201ENST00000583919 79 ntBASIC18.92■□□□□ 0.62
USP11P51784 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.92■□□□□ 0.62
USP11P51784 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.92■□□□□ 0.62
USP11P51784 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.92■□□□□ 0.62
USP11P51784 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms