Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF4P48230 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TM4SF4P48230 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.89■□□□□ 0.61
TM4SF4P48230 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
TM4SF4P48230 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.89■□□□□ 0.61
TM4SF4P48230 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF4P48230 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.89■□□□□ 0.61
TM4SF4P48230 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF4P48230 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF4P48230 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.88■□□□□ 0.61
TM4SF4P48230 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 AL671710.1-201ENST00000610245 2349 ntBASIC18.88■□□□□ 0.61
TM4SF4P48230 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF4P48230 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TM4SF4P48230 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.88■□□□□ 0.61
TM4SF4P48230 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.88■□□□□ 0.61
TM4SF4P48230 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF4P48230 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.88■□□□□ 0.61
TM4SF4P48230 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TM4SF4P48230 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.88■□□□□ 0.61
TM4SF4P48230 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF4P48230 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF4P48230 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TM4SF4P48230 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.88■□□□□ 0.61
TM4SF4P48230 AC090164.3-201ENST00000610780 2143 ntBASIC18.88■□□□□ 0.61
TM4SF4P48230 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM4SF4P48230 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.87■□□□□ 0.61
TM4SF4P48230 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF4P48230 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF4P48230 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TM4SF4P48230 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF4P48230 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TM4SF4P48230 MIR1247-201ENST00000408206 136 ntBASIC18.87■□□□□ 0.61
TM4SF4P48230 GPAA1P2-201ENST00000417923 928 ntBASIC18.87■□□□□ 0.61
TM4SF4P48230 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TM4SF4P48230 AC093724.1-201ENST00000448659 1027 ntBASIC18.87■□□□□ 0.61
TM4SF4P48230 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.87■□□□□ 0.61
TM4SF4P48230 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.87■□□□□ 0.61
TM4SF4P48230 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
TM4SF4P48230 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.87■□□□□ 0.61
TM4SF4P48230 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.87■□□□□ 0.61
TM4SF4P48230 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.87■□□□□ 0.61
TM4SF4P48230 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.87■□□□□ 0.61
TM4SF4P48230 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.87■□□□□ 0.61
TM4SF4P48230 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.87■□□□□ 0.61
TM4SF4P48230 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.87■□□□□ 0.61
TM4SF4P48230 AC013467.2-201ENST00000605472 835 ntBASIC18.87■□□□□ 0.61
TM4SF4P48230 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TM4SF4P48230 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TM4SF4P48230 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.87■□□□□ 0.61
TM4SF4P48230 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TM4SF4P48230 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.87■□□□□ 0.61
TM4SF4P48230 AL589702.1-201ENST00000641229 1509 ntBASIC18.87■□□□□ 0.61
TM4SF4P48230 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF4P48230 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TM4SF4P48230 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.86■□□□□ 0.61
TM4SF4P48230 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.86■□□□□ 0.61
TM4SF4P48230 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF4P48230 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF4P48230 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF4P48230 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TM4SF4P48230 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF4P48230 KRT8P22-201ENST00000562317 1415 ntBASIC18.86■□□□□ 0.61
TM4SF4P48230 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF4P48230 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF4P48230 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.86■□□□□ 0.61
TM4SF4P48230 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.86■□□□□ 0.61
TM4SF4P48230 RPL7P3-201ENST00000441388 714 ntBASIC18.86■□□□□ 0.61
TM4SF4P48230 RN7SL399P-201ENST00000471648 279 ntBASIC18.86■□□□□ 0.61
TM4SF4P48230 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.86■□□□□ 0.61
TM4SF4P48230 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
TM4SF4P48230 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TM4SF4P48230 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.86■□□□□ 0.61
TM4SF4P48230 AC025048.3-201ENST00000590609 569 ntBASIC18.86■□□□□ 0.61
TM4SF4P48230 AC005702.4-201ENST00000618393 416 ntBASIC18.86■□□□□ 0.61
TM4SF4P48230 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.86■□□□□ 0.61
TM4SF4P48230 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF4P48230 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.86■□□□□ 0.61
TM4SF4P48230 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF4P48230 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.86■□□□□ 0.61
TM4SF4P48230 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms