Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.74■□□□□ 0.75
NEDD4P46934 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.74■□□□□ 0.75
NEDD4P46934 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.74■□□□□ 0.75
NEDD4P46934 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NEDD4P46934 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NEDD4P46934 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 UPF3AP3-201ENST00000420996 769 ntBASIC19.74■□□□□ 0.75
NEDD4P46934 DNAJB3-201ENST00000446806 729 ntBASIC19.74■□□□□ 0.75
NEDD4P46934 AC112482.1-201ENST00000492080 688 ntBASIC19.74■□□□□ 0.75
NEDD4P46934 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.74■□□□□ 0.75
NEDD4P46934 AC109635.5-201ENST00000533593 962 ntBASIC19.74■□□□□ 0.75
NEDD4P46934 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.74■□□□□ 0.75
NEDD4P46934 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.74■□□□□ 0.75
NEDD4P46934 MIR3909-201ENST00000579518 119 ntBASIC19.74■□□□□ 0.75
NEDD4P46934 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEDD4P46934 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.74■□□□□ 0.75
NEDD4P46934 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.73■□□□□ 0.75
NEDD4P46934 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
NEDD4P46934 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
NEDD4P46934 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NEDD4P46934 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NEDD4P46934 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
NEDD4P46934 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.73■□□□□ 0.75
NEDD4P46934 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.73■□□□□ 0.75
NEDD4P46934 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.73■□□□□ 0.75
NEDD4P46934 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NEDD4P46934 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
NEDD4P46934 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
NEDD4P46934 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.73■□□□□ 0.75
NEDD4P46934 HTR5BP-201ENST00000430851 1154 ntBASIC19.73■□□□□ 0.75
NEDD4P46934 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.73■□□□□ 0.75
NEDD4P46934 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.73■□□□□ 0.75
NEDD4P46934 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.73■□□□□ 0.75
NEDD4P46934 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.73■□□□□ 0.75
NEDD4P46934 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.73■□□□□ 0.75
NEDD4P46934 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
NEDD4P46934 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.73■□□□□ 0.75
NEDD4P46934 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.73■□□□□ 0.75
NEDD4P46934 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.73■□□□□ 0.75
NEDD4P46934 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.73■□□□□ 0.75
NEDD4P46934 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NEDD4P46934 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD4P46934 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.73■□□□□ 0.75
NEDD4P46934 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NEDD4P46934 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 AC006538.1-201ENST00000567905 1585 ntBASIC19.72■□□□□ 0.75
NEDD4P46934 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.72■□□□□ 0.75
NEDD4P46934 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.72■□□□□ 0.75
NEDD4P46934 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.72■□□□□ 0.75
NEDD4P46934 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.72■□□□□ 0.75
NEDD4P46934 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 AL031731.1-201ENST00000642131 2094 ntBASIC19.72■□□□□ 0.75
NEDD4P46934 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NEDD4P46934 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.72■□□□□ 0.75
NEDD4P46934 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.72■□□□□ 0.75
NEDD4P46934 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.72■□□□□ 0.75
NEDD4P46934 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD4P46934 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.72■□□□□ 0.75
NEDD4P46934 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.72■□□□□ 0.75
NEDD4P46934 AC055717.3-201ENST00000622967 595 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms