Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.24■□□□□ 0.03
GDF1P27539 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
GDF1P27539 TIMM8BP1-201ENST00000452384 211 ntBASIC15.24■□□□□ 0.03
GDF1P27539 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.24■□□□□ 0.03
GDF1P27539 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.24■□□□□ 0.03
GDF1P27539 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.24■□□□□ 0.03
GDF1P27539 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
GDF1P27539 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.24■□□□□ 0.03
GDF1P27539 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.24■□□□□ 0.03
GDF1P27539 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.24■□□□□ 0.03
GDF1P27539 AL009183.1-201ENST00000603760 355 ntBASIC15.24■□□□□ 0.03
GDF1P27539 AL031055.1-201ENST00000606362 631 ntBASIC15.24■□□□□ 0.03
GDF1P27539 AL161645.1-201ENST00000622716 1255 ntBASIC15.24■□□□□ 0.03
GDF1P27539 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.24■□□□□ 0.03
GDF1P27539 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
GDF1P27539 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
GDF1P27539 AC108860.2-201ENST00000562760 2183 ntBASIC15.24■□□□□ 0.03
GDF1P27539 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
GDF1P27539 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
GDF1P27539 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.23■□□□□ 0.03
GDF1P27539 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
GDF1P27539 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.23■□□□□ 0.03
GDF1P27539 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.23■□□□□ 0.03
GDF1P27539 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.23■□□□□ 0.03
GDF1P27539 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GDF1P27539 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.23■□□□□ 0.03
GDF1P27539 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.23■□□□□ 0.03
GDF1P27539 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.23■□□□□ 0.03
GDF1P27539 AL355306.1-201ENST00000415580 579 ntBASIC15.23■□□□□ 0.03
GDF1P27539 AL671277.1-201ENST00000429656 993 ntBASIC15.23■□□□□ 0.03
GDF1P27539 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.23■□□□□ 0.03
GDF1P27539 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.23■□□□□ 0.03
GDF1P27539 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.23■□□□□ 0.03
GDF1P27539 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
GDF1P27539 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.23■□□□□ 0.03
GDF1P27539 AP000344.2-201ENST00000512987 629 ntBASIC15.23■□□□□ 0.03
GDF1P27539 FAM86C2P-203ENST00000528684 1004 ntBASIC15.23■□□□□ 0.03
GDF1P27539 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
GDF1P27539 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.23■□□□□ 0.03
GDF1P27539 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.23■□□□□ 0.03
GDF1P27539 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.23■□□□□ 0.03
GDF1P27539 CYP2A7P1-201ENST00000595391 815 ntBASIC15.23■□□□□ 0.03
GDF1P27539 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.23■□□□□ 0.03
GDF1P27539 AC099522.2-201ENST00000607001 744 ntBASIC15.23■□□□□ 0.03
GDF1P27539 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.23■□□□□ 0.03
GDF1P27539 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.23■□□□□ 0.03
GDF1P27539 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.23■□□□□ 0.03
GDF1P27539 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GDF1P27539 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GDF1P27539 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GDF1P27539 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.22■□□□□ 0.03
GDF1P27539 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.22■□□□□ 0.03
GDF1P27539 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GDF1P27539 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.22■□□□□ 0.03
GDF1P27539 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GDF1P27539 RNU1-129P-201ENST00000384064 167 ntBASIC15.22■□□□□ 0.03
GDF1P27539 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 SPDYE11-202ENST00000450699 704 ntBASIC15.22■□□□□ 0.03
GDF1P27539 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.22■□□□□ 0.03
GDF1P27539 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.22■□□□□ 0.03
GDF1P27539 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.22■□□□□ 0.03
GDF1P27539 SPDYE9P-201ENST00000570642 692 ntBASIC15.22■□□□□ 0.03
GDF1P27539 U1.21-201ENST00000580816 167 ntBASIC15.22■□□□□ 0.03
GDF1P27539 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 SPDYE10P-202ENST00000612005 668 ntBASIC15.22■□□□□ 0.03
GDF1P27539 SPDYE8P-202ENST00000612377 668 ntBASIC15.22■□□□□ 0.03
GDF1P27539 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.22■□□□□ 0.03
GDF1P27539 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDF1P27539 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms