Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFAP04085 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFAP04085 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PDGFAP04085 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFAP04085 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFAP04085 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
PDGFAP04085 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.77■□□□□ 0.12
PDGFAP04085 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.77■□□□□ 0.12
PDGFAP04085 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFAP04085 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFAP04085 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFAP04085 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFAP04085 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFAP04085 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PDGFAP04085 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFAP04085 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFAP04085 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFAP04085 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFAP04085 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFAP04085 MYCLP1-201ENST00000372451 1075 ntBASIC15.77■□□□□ 0.12
PDGFAP04085 AL355306.1-201ENST00000415580 579 ntBASIC15.77■□□□□ 0.12
PDGFAP04085 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PDGFAP04085 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFAP04085 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFAP04085 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.77■□□□□ 0.12
PDGFAP04085 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.77■□□□□ 0.12
PDGFAP04085 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.77■□□□□ 0.12
PDGFAP04085 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.77■□□□□ 0.12
PDGFAP04085 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFAP04085 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.77■□□□□ 0.11
PDGFAP04085 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFAP04085 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFAP04085 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFAP04085 AC108860.2-201ENST00000562760 2183 ntBASIC15.77■□□□□ 0.11
PDGFAP04085 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFAP04085 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFAP04085 REXO1L9P-201ENST00000604264 2108 ntBASIC15.77■□□□□ 0.11
PDGFAP04085 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
PDGFAP04085 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
PDGFAP04085 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFAP04085 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFAP04085 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFAP04085 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFAP04085 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFAP04085 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFAP04085 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFAP04085 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PDGFAP04085 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PDGFAP04085 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PDGFAP04085 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PDGFAP04085 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 AC244107.1-201ENST00000442033 332 ntBASIC15.76■□□□□ 0.11
PDGFAP04085 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.76■□□□□ 0.11
PDGFAP04085 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 AC026120.1-201ENST00000611536 926 ntBASIC15.76■□□□□ 0.11
PDGFAP04085 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PDGFAP04085 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PDGFAP04085 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PDGFAP04085 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFAP04085 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFAP04085 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.75■□□□□ 0.11
PDGFAP04085 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.75■□□□□ 0.11
PDGFAP04085 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.75■□□□□ 0.11
PDGFAP04085 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.75■□□□□ 0.11
PDGFAP04085 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
PDGFAP04085 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFAP04085 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PDGFAP04085 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms