Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCNKO75909 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCNKO75909 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCNKO75909 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCNKO75909 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CCNKO75909 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CCNKO75909 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCNKO75909 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.62□□□□□ -0.07
CCNKO75909 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.62□□□□□ -0.07
CCNKO75909 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.61□□□□□ -0.07
CCNKO75909 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.61□□□□□ -0.07
CCNKO75909 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CCNKO75909 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CCNKO75909 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 AC008403.3-201ENST00000598924 454 ntBASIC14.61□□□□□ -0.07
CCNKO75909 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 AL445675.2-201ENST00000620291 557 ntBASIC14.61□□□□□ -0.07
CCNKO75909 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCNKO75909 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCNKO75909 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.61□□□□□ -0.07
CCNKO75909 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.61□□□□□ -0.07
CCNKO75909 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.61□□□□□ -0.07
CCNKO75909 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.61□□□□□ -0.07
CCNKO75909 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCNKO75909 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCNKO75909 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.61□□□□□ -0.07
CCNKO75909 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCNKO75909 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.6□□□□□ -0.07
CCNKO75909 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCNKO75909 AC007191.1-201ENST00000623179 2995 ntBASIC14.6□□□□□ -0.07
CCNKO75909 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCNKO75909 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CCNKO75909 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.6□□□□□ -0.07
CCNKO75909 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.6□□□□□ -0.07
CCNKO75909 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.6□□□□□ -0.07
CCNKO75909 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.6□□□□□ -0.07
CCNKO75909 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.6□□□□□ -0.07
CCNKO75909 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CCNKO75909 AC233263.1-201ENST00000578059 224 ntBASIC14.6□□□□□ -0.07
CCNKO75909 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
CCNKO75909 MTDHP1-201ENST00000605323 784 ntBASIC14.6□□□□□ -0.07
CCNKO75909 AC008622.2-201ENST00000617006 1229 ntBASIC14.6□□□□□ -0.07
CCNKO75909 AC131212.4-201ENST00000623606 975 ntBASIC14.6□□□□□ -0.07
CCNKO75909 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.6□□□□□ -0.07
CCNKO75909 AC087386.2-201ENST00000623212 4637 ntBASIC14.6□□□□□ -0.07
CCNKO75909 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.6□□□□□ -0.07
CCNKO75909 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
CCNKO75909 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCNKO75909 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CCNKO75909 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCNKO75909 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms