Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.92■□□□□ 0.3
GPC4O75487 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.92■□□□□ 0.3
GPC4O75487 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
GPC4O75487 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GPC4O75487 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.92■□□□□ 0.3
GPC4O75487 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GPC4O75487 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GPC4O75487 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.91■□□□□ 0.3
GPC4O75487 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GPC4O75487 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
GPC4O75487 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.91■□□□□ 0.3
GPC4O75487 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.91■□□□□ 0.3
GPC4O75487 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.91■□□□□ 0.3
GPC4O75487 FAM197Y8-203ENST00000450145 560 ntBASIC16.91■□□□□ 0.3
GPC4O75487 AC018712.1-201ENST00000455767 687 ntBASIC16.91■□□□□ 0.3
GPC4O75487 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.91■□□□□ 0.3
GPC4O75487 RNPS1P1-201ENST00000507437 918 ntBASIC16.91■□□□□ 0.3
GPC4O75487 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GPC4O75487 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.91■□□□□ 0.3
GPC4O75487 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.91■□□□□ 0.3
GPC4O75487 AC139887.3-201ENST00000568585 713 ntBASIC16.91■□□□□ 0.3
GPC4O75487 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.91■□□□□ 0.3
GPC4O75487 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.91■□□□□ 0.3
GPC4O75487 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GPC4O75487 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GPC4O75487 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPC4O75487 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GPC4O75487 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.9■□□□□ 0.3
GPC4O75487 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
GPC4O75487 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.9■□□□□ 0.3
GPC4O75487 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.9■□□□□ 0.3
GPC4O75487 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GPC4O75487 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.9■□□□□ 0.3
GPC4O75487 AC073648.2-201ENST00000510116 352 ntBASIC16.9■□□□□ 0.3
GPC4O75487 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.9■□□□□ 0.3
GPC4O75487 AL160237.2-201ENST00000556165 472 ntBASIC16.9■□□□□ 0.3
GPC4O75487 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.9■□□□□ 0.3
GPC4O75487 AL139424.1-201ENST00000607572 797 ntBASIC16.9■□□□□ 0.3
GPC4O75487 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.9■□□□□ 0.3
GPC4O75487 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 AC004706.3-202ENST00000621574 984 ntBASIC16.9■□□□□ 0.3
GPC4O75487 AC107918.4-202ENST00000641623 219 ntBASIC16.9■□□□□ 0.3
GPC4O75487 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GPC4O75487 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
GPC4O75487 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
GPC4O75487 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
GPC4O75487 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GPC4O75487 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
GPC4O75487 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GPC4O75487 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.9■□□□□ 0.3
GPC4O75487 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPC4O75487 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.89■□□□□ 0.3
GPC4O75487 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
GPC4O75487 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
GPC4O75487 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GPC4O75487 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.89■□□□□ 0.29
GPC4O75487 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
GPC4O75487 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GPC4O75487 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPC4O75487 KRT18P67-201ENST00000432816 1264 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms