Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM3O75382 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM3O75382 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRIM3O75382 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRIM3O75382 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM3O75382 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRIM3O75382 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 PMS2P1-201ENST00000431037 1228 ntBASIC15.75■□□□□ 0.11
TRIM3O75382 RPS15P9-201ENST00000494093 319 ntBASIC15.75■□□□□ 0.11
TRIM3O75382 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM3O75382 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRIM3O75382 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM3O75382 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRIM3O75382 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM3O75382 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRIM3O75382 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRIM3O75382 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRIM3O75382 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRIM3O75382 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TRIM3O75382 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.75■□□□□ 0.11
TRIM3O75382 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRIM3O75382 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM3O75382 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM3O75382 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRIM3O75382 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM3O75382 AL590787.1-201ENST00000568856 1315 ntBASIC15.74■□□□□ 0.11
TRIM3O75382 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM3O75382 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM3O75382 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM3O75382 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM3O75382 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRIM3O75382 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.74■□□□□ 0.11
TRIM3O75382 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRIM3O75382 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 KRT18P58-201ENST00000527480 1120 ntBASIC15.74■□□□□ 0.11
TRIM3O75382 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM3O75382 AC008667.4-201ENST00000607370 168 ntBASIC15.74■□□□□ 0.11
TRIM3O75382 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRIM3O75382 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM3O75382 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM3O75382 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM3O75382 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM3O75382 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM3O75382 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM3O75382 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM3O75382 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM3O75382 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.73■□□□□ 0.11
TRIM3O75382 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 AP002414.1-201ENST00000391405 1147 ntBASIC15.73■□□□□ 0.11
TRIM3O75382 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM3O75382 PTCHD3P3-201ENST00000403073 906 ntBASIC15.73■□□□□ 0.11
TRIM3O75382 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRIM3O75382 IGHV3-65-201ENST00000523210 341 ntBASIC15.73■□□□□ 0.11
TRIM3O75382 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM3O75382 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM3O75382 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM3O75382 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms