Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CPNE3O75131 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.19■□□□□ 0.18
CPNE3O75131 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 AL118508.1-201ENST00000613502 2345 ntBASIC16.19■□□□□ 0.18
CPNE3O75131 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CPNE3O75131 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.19■□□□□ 0.18
CPNE3O75131 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.19■□□□□ 0.18
CPNE3O75131 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CPNE3O75131 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CPNE3O75131 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CPNE3O75131 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CPNE3O75131 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 AC011676.5-201ENST00000624864 2660 ntBASIC16.19■□□□□ 0.18
CPNE3O75131 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CPNE3O75131 NKILA-202ENST00000614771 2598 ntBASIC16.19■□□□□ 0.18
CPNE3O75131 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
CPNE3O75131 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.19■□□□□ 0.18
CPNE3O75131 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE3O75131 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.18■□□□□ 0.18
CPNE3O75131 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.18■□□□□ 0.18
CPNE3O75131 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CPNE3O75131 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.18■□□□□ 0.18
CPNE3O75131 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.18■□□□□ 0.18
CPNE3O75131 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CPNE3O75131 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.18■□□□□ 0.18
CPNE3O75131 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.18■□□□□ 0.18
CPNE3O75131 AL031432.2-201ENST00000566714 459 ntBASIC16.18■□□□□ 0.18
CPNE3O75131 AL928711.1-201ENST00000570165 459 ntBASIC16.18■□□□□ 0.18
CPNE3O75131 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.18■□□□□ 0.18
CPNE3O75131 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.18■□□□□ 0.18
CPNE3O75131 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPNE3O75131 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.18■□□□□ 0.18
CPNE3O75131 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.17■□□□□ 0.18
CPNE3O75131 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.17■□□□□ 0.18
CPNE3O75131 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.17■□□□□ 0.18
CPNE3O75131 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CPNE3O75131 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.17■□□□□ 0.18
CPNE3O75131 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE3O75131 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CPNE3O75131 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE3O75131 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.17■□□□□ 0.18
CPNE3O75131 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CPNE3O75131 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms