Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
LCMT2O60294 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCMT2O60294 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCMT2O60294 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.08■□□□□ 0.17
LCMT2O60294 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
LCMT2O60294 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCMT2O60294 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCMT2O60294 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCMT2O60294 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCMT2O60294 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LCMT2O60294 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCMT2O60294 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCMT2O60294 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LCMT2O60294 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.08■□□□□ 0.16
LCMT2O60294 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.08■□□□□ 0.16
LCMT2O60294 HMGA1P7-201ENST00000406908 502 ntBASIC16.08■□□□□ 0.16
LCMT2O60294 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.08■□□□□ 0.16
LCMT2O60294 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCMT2O60294 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LCMT2O60294 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.08■□□□□ 0.16
LCMT2O60294 PGAM5P1-201ENST00000518923 814 ntBASIC16.08■□□□□ 0.16
LCMT2O60294 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.08■□□□□ 0.16
LCMT2O60294 AC087641.1-201ENST00000557561 1021 ntBASIC16.08■□□□□ 0.16
LCMT2O60294 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.08■□□□□ 0.16
LCMT2O60294 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.08■□□□□ 0.16
LCMT2O60294 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
LCMT2O60294 AC023141.13-201ENST00000604991 943 ntBASIC16.08■□□□□ 0.16
LCMT2O60294 AL513190.1-201ENST00000621254 727 ntBASIC16.08■□□□□ 0.16
LCMT2O60294 AC007064.4-201ENST00000637740 555 ntBASIC16.08■□□□□ 0.16
LCMT2O60294 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCMT2O60294 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCMT2O60294 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
LCMT2O60294 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.08■□□□□ 0.16
LCMT2O60294 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCMT2O60294 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LCMT2O60294 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCMT2O60294 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCMT2O60294 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCMT2O60294 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.07■□□□□ 0.16
LCMT2O60294 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCMT2O60294 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LCMT2O60294 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCMT2O60294 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCMT2O60294 AC023274.1-201ENST00000418278 595 ntBASIC16.07■□□□□ 0.16
LCMT2O60294 HCG4-201ENST00000418983 998 ntBASIC16.07■□□□□ 0.16
LCMT2O60294 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.07■□□□□ 0.16
LCMT2O60294 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCMT2O60294 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.07■□□□□ 0.16
LCMT2O60294 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
LCMT2O60294 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LCMT2O60294 KRT19P2-202ENST00000557173 1012 ntBASIC16.07■□□□□ 0.16
LCMT2O60294 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCMT2O60294 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.07■□□□□ 0.16
LCMT2O60294 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.07■□□□□ 0.16
LCMT2O60294 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.07■□□□□ 0.16
LCMT2O60294 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.07■□□□□ 0.16
LCMT2O60294 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCMT2O60294 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCMT2O60294 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.07■□□□□ 0.16
LCMT2O60294 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCMT2O60294 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCMT2O60294 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCMT2O60294 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.07■□□□□ 0.16
LCMT2O60294 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.07■□□□□ 0.16
LCMT2O60294 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCMT2O60294 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
LCMT2O60294 PKD1P1-201ENST00000458669 6805 ntBASIC16.07■□□□□ 0.16
LCMT2O60294 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCMT2O60294 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.06■□□□□ 0.16
LCMT2O60294 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.06■□□□□ 0.16
LCMT2O60294 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.06■□□□□ 0.16
LCMT2O60294 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LCMT2O60294 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LCMT2O60294 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LCMT2O60294 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LCMT2O60294 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.06■□□□□ 0.16
LCMT2O60294 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
LCMT2O60294 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.06■□□□□ 0.16
LCMT2O60294 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.06■□□□□ 0.16
LCMT2O60294 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 AL031432.2-201ENST00000566714 459 ntBASIC16.06■□□□□ 0.16
LCMT2O60294 AL928711.1-201ENST00000570165 459 ntBASIC16.06■□□□□ 0.16
LCMT2O60294 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.06■□□□□ 0.16
LCMT2O60294 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.06■□□□□ 0.16
LCMT2O60294 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.06■□□□□ 0.16
LCMT2O60294 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LCMT2O60294 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms