Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.87■□□□□ 0.61
ACTN4O43707 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.87■□□□□ 0.61
ACTN4O43707 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ACTN4O43707 TP73-AS1-207ENST00000624167 988 ntBASIC18.87■□□□□ 0.61
ACTN4O43707 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.87■□□□□ 0.61
ACTN4O43707 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ACTN4O43707 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.87■□□□□ 0.61
ACTN4O43707 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACTN4O43707 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ACTN4O43707 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
ACTN4O43707 GGT4P-201ENST00000623672 1708 ntBASIC18.86■□□□□ 0.61
ACTN4O43707 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACTN4O43707 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ACTN4O43707 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
ACTN4O43707 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ACTN4O43707 LINC02199-201ENST00000506655 2702 ntBASIC18.86■□□□□ 0.61
ACTN4O43707 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ACTN4O43707 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACTN4O43707 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ACTN4O43707 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ACTN4O43707 RPS2P1-201ENST00000434010 821 ntBASIC18.86■□□□□ 0.61
ACTN4O43707 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.86■□□□□ 0.61
ACTN4O43707 RPS15P9-201ENST00000494093 319 ntBASIC18.86■□□□□ 0.61
ACTN4O43707 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.86■□□□□ 0.61
ACTN4O43707 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.86■□□□□ 0.61
ACTN4O43707 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.86■□□□□ 0.61
ACTN4O43707 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
ACTN4O43707 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.86■□□□□ 0.61
ACTN4O43707 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ACTN4O43707 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.86■□□□□ 0.61
ACTN4O43707 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.86■□□□□ 0.61
ACTN4O43707 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ACTN4O43707 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACTN4O43707 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.86■□□□□ 0.61
ACTN4O43707 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ACTN4O43707 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.86■□□□□ 0.61
ACTN4O43707 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACTN4O43707 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.86■□□□□ 0.61
ACTN4O43707 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.86■□□□□ 0.61
ACTN4O43707 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.86■□□□□ 0.61
ACTN4O43707 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.85■□□□□ 0.61
ACTN4O43707 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ACTN4O43707 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.85■□□□□ 0.61
ACTN4O43707 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
ACTN4O43707 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ACTN4O43707 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 AL031731.1-201ENST00000642131 2094 ntBASIC18.85■□□□□ 0.61
ACTN4O43707 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
ACTN4O43707 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
ACTN4O43707 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.85■□□□□ 0.61
ACTN4O43707 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.85■□□□□ 0.61
ACTN4O43707 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
ACTN4O43707 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.85■□□□□ 0.61
ACTN4O43707 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.85■□□□□ 0.61
ACTN4O43707 AC091167.2-201ENST00000579581 588 ntBASIC18.85■□□□□ 0.61
ACTN4O43707 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.85■□□□□ 0.61
ACTN4O43707 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.85■□□□□ 0.61
ACTN4O43707 AC012183.1-201ENST00000625197 499 ntBASIC18.85■□□□□ 0.61
ACTN4O43707 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.85■□□□□ 0.61
ACTN4O43707 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.85■□□□□ 0.61
ACTN4O43707 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.85■□□□□ 0.61
ACTN4O43707 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
ACTN4O43707 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.85■□□□□ 0.61
ACTN4O43707 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.85■□□□□ 0.61
ACTN4O43707 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACTN4O43707 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ACTN4O43707 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.85■□□□□ 0.61
ACTN4O43707 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACTN4O43707 KRT8P39-201ENST00000396270 1433 ntBASIC18.84■□□□□ 0.61
ACTN4O43707 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
ACTN4O43707 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACTN4O43707 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
ACTN4O43707 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACTN4O43707 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACTN4O43707 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.84■□□□□ 0.61
ACTN4O43707 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.84■□□□□ 0.61
ACTN4O43707 AC131009.4-201ENST00000624048 1740 ntBASIC18.84■□□□□ 0.61
ACTN4O43707 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.84■□□□□ 0.61
ACTN4O43707 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACTN4O43707 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ACTN4O43707 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACTN4O43707 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms