Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FOXN1O15353 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN1O15353 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
FOXN1O15353 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
FOXN1O15353 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXN1O15353 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
FOXN1O15353 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXN1O15353 LINC01225-203ENST00000563550 1244 ntBASIC20.03■□□□□ 0.8
FOXN1O15353 RARRES2P8-201ENST00000566335 367 ntBASIC20.03■□□□□ 0.8
FOXN1O15353 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXN1O15353 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXN1O15353 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
FOXN1O15353 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 AL049757.1-201ENST00000616842 1596 ntBASIC20.03■□□□□ 0.8
FOXN1O15353 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN1O15353 AKAP8P1-201ENST00000434743 1349 ntBASIC20.02■□□□□ 0.8
FOXN1O15353 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
FOXN1O15353 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 AC099398.1-201ENST00000567919 2776 ntBASIC20.02■□□□□ 0.8
FOXN1O15353 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
FOXN1O15353 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXN1O15353 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 DGCR5-201ENST00000399539 862 ntBASIC20.02■□□□□ 0.8
FOXN1O15353 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
FOXN1O15353 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC20.02■□□□□ 0.8
FOXN1O15353 RN7SL752P-201ENST00000463779 287 ntBASIC20.02■□□□□ 0.8
FOXN1O15353 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXN1O15353 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.02■□□□□ 0.8
FOXN1O15353 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
FOXN1O15353 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.02■□□□□ 0.8
FOXN1O15353 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXN1O15353 AC007541.1-201ENST00000570282 1469 ntBASIC20.02■□□□□ 0.8
FOXN1O15353 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXN1O15353 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXN1O15353 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
FOXN1O15353 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
FOXN1O15353 AC097637.2-201ENST00000624096 1997 ntBASIC20.02■□□□□ 0.8
FOXN1O15353 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN1O15353 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FOXN1O15353 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.02■□□□□ 0.79
FOXN1O15353 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
FOXN1O15353 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXN1O15353 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXN1O15353 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXN1O15353 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.01■□□□□ 0.79
FOXN1O15353 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXN1O15353 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXN1O15353 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXN1O15353 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
FOXN1O15353 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
FOXN1O15353 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.01■□□□□ 0.79
FOXN1O15353 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXN1O15353 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXN1O15353 AC104794.3-201ENST00000566840 1248 ntBASIC20.01■□□□□ 0.79
FOXN1O15353 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.01■□□□□ 0.79
FOXN1O15353 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXN1O15353 AC073592.8-201ENST00000624126 511 ntBASIC20.01■□□□□ 0.79
FOXN1O15353 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.01■□□□□ 0.79
FOXN1O15353 AP001094.4-201ENST00000579008 2176 ntBASIC20.01■□□□□ 0.79
FOXN1O15353 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
FOXN1O15353 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXN1O15353 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXN1O15353 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.01■□□□□ 0.79
FOXN1O15353 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20■□□□□ 0.79
FOXN1O15353 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20■□□□□ 0.79
FOXN1O15353 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
FOXN1O15353 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20■□□□□ 0.79
FOXN1O15353 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
FOXN1O15353 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 COX5BP2-201ENST00000392354 334 ntBASIC20■□□□□ 0.79
FOXN1O15353 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms