Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC26.65■■□□□ 1.86
CHD1O14646 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHD1O14646 AL008638.5-201ENST00000623814 1298 ntBASIC26.65■■□□□ 1.86
CHD1O14646 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CHD1O14646 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
CHD1O14646 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC26.64■■□□□ 1.86
CHD1O14646 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CHD1O14646 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC26.64■■□□□ 1.86
CHD1O14646 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CHD1O14646 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CHD1O14646 HIST3H2BA-201ENST00000436555 524 ntBASIC26.64■■□□□ 1.85
CHD1O14646 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC26.64■■□□□ 1.85
CHD1O14646 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
CHD1O14646 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC26.64■■□□□ 1.85
CHD1O14646 OARD1-212ENST00000482515 832 ntTSL 2 BASIC26.64■■□□□ 1.85
CHD1O14646 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC26.64■■□□□ 1.85
CHD1O14646 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC26.64■■□□□ 1.85
CHD1O14646 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC26.64■■□□□ 1.85
CHD1O14646 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC26.64■■□□□ 1.85
CHD1O14646 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC26.64■■□□□ 1.85
CHD1O14646 SPCS2P2-201ENST00000603270 608 ntBASIC26.64■■□□□ 1.85
CHD1O14646 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC26.64■■□□□ 1.85
CHD1O14646 AC128714.1-201ENST00000637035 887 ntBASIC26.64■■□□□ 1.85
CHD1O14646 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC26.64■■□□□ 1.85
CHD1O14646 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CHD1O14646 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC26.64■■□□□ 1.85
CHD1O14646 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD1O14646 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD1O14646 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC26.63■■□□□ 1.85
CHD1O14646 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CHD1O14646 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
CHD1O14646 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD1O14646 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC26.63■■□□□ 1.85
CHD1O14646 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD1O14646 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD1O14646 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD1O14646 AC138028.4-201ENST00000564984 1845 ntBASIC26.62■■□□□ 1.85
CHD1O14646 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CHD1O14646 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD1O14646 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD1O14646 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD1O14646 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD1O14646 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD1O14646 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC26.62■■□□□ 1.85
CHD1O14646 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC26.62■■□□□ 1.85
CHD1O14646 HCG18-245ENST00000602550 559 ntTSL 4 BASIC26.62■■□□□ 1.85
CHD1O14646 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD1O14646 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC26.62■■□□□ 1.85
CHD1O14646 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC26.62■■□□□ 1.85
CHD1O14646 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CHD1O14646 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD1O14646 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD1O14646 UPF3AP2-201ENST00000457924 1132 ntBASIC26.62■■□□□ 1.85
CHD1O14646 SCARNA20.5-201ENST00000516991 142 ntBASIC26.62■■□□□ 1.85
CHD1O14646 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC26.62■■□□□ 1.85
CHD1O14646 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC26.62■■□□□ 1.85
CHD1O14646 AC091271.1-201ENST00000611877 1162 ntBASIC26.62■■□□□ 1.85
CHD1O14646 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD1O14646 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CHD1O14646 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD1O14646 AL671710.1-201ENST00000610245 2349 ntBASIC26.61■■□□□ 1.85
CHD1O14646 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD1O14646 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CHD1O14646 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CHD1O14646 MSTO2P-201ENST00000314835 1709 ntBASIC26.61■■□□□ 1.85
CHD1O14646 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD1O14646 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
CHD1O14646 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC26.61■■□□□ 1.85
CHD1O14646 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD1O14646 TMEM198B-204ENST00000484016 896 ntBASIC26.61■■□□□ 1.85
CHD1O14646 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC26.61■■□□□ 1.85
CHD1O14646 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC26.61■■□□□ 1.85
CHD1O14646 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CHD1O14646 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC26.61■■□□□ 1.85
CHD1O14646 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
CHD1O14646 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD1O14646 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD1O14646 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC26.61■■□□□ 1.85
CHD1O14646 USP49-202ENST00000373010 2446 ntTSL 5 BASIC26.6■■□□□ 1.85
CHD1O14646 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CHD1O14646 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CHD1O14646 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC26.6■■□□□ 1.85
CHD1O14646 AC012441.1-201ENST00000446669 685 ntBASIC26.6■■□□□ 1.85
CHD1O14646 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CHD1O14646 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC26.6■■□□□ 1.85
CHD1O14646 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
CHD1O14646 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC26.6■■□□□ 1.85
CHD1O14646 AL359711.2-201ENST00000563105 872 ntBASIC26.6■■□□□ 1.85
CHD1O14646 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC26.6■■□□□ 1.85
CHD1O14646 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC26.6■■□□□ 1.85
CHD1O14646 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
CHD1O14646 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC26.6■■□□□ 1.85
CHD1O14646 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC26.6■■□□□ 1.85
CHD1O14646 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CHD1O14646 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CHD1O14646 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CHD1O14646 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC26.6■■□□□ 1.85
CHD1O14646 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD1O14646 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CHD1O14646 MPRIPP1-201ENST00000452433 1089 ntBASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms