Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.97■□□□□ 0.31
TRIM38O00635 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TRIM38O00635 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM38O00635 AC010507.1-201ENST00000633895 436 ntBASIC16.97■□□□□ 0.31
TRIM38O00635 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRIM38O00635 AC060834.1-201ENST00000443027 2032 ntBASIC16.97■□□□□ 0.31
TRIM38O00635 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TRIM38O00635 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TRIM38O00635 AC009336.1-201ENST00000608941 1553 ntBASIC16.97■□□□□ 0.31
TRIM38O00635 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM38O00635 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM38O00635 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM38O00635 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM38O00635 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM38O00635 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM38O00635 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM38O00635 REXO1L11P-201ENST00000620964 1927 ntBASIC16.96■□□□□ 0.31
TRIM38O00635 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM38O00635 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM38O00635 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRIM38O00635 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM38O00635 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM38O00635 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM38O00635 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRIM38O00635 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM38O00635 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM38O00635 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM38O00635 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM38O00635 OR7E47P-204ENST00000575924 449 ntBASIC16.96■□□□□ 0.31
TRIM38O00635 AL353135.1-201ENST00000606729 504 ntBASIC16.96■□□□□ 0.31
TRIM38O00635 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM38O00635 AC004877.2-201ENST00000623941 599 ntBASIC16.96■□□□□ 0.31
TRIM38O00635 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRIM38O00635 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM38O00635 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM38O00635 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM38O00635 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM38O00635 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM38O00635 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM38O00635 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM38O00635 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
TRIM38O00635 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM38O00635 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM38O00635 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM38O00635 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM38O00635 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM38O00635 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM38O00635 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM38O00635 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM38O00635 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM38O00635 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRIM38O00635 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRIM38O00635 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 LINC00982-205ENST00000420957 435 ntBASIC16.95■□□□□ 0.3
TRIM38O00635 CNN2P11-201ENST00000429351 262 ntBASIC16.95■□□□□ 0.3
TRIM38O00635 MKNK2P1-201ENST00000437526 628 ntBASIC16.95■□□□□ 0.3
TRIM38O00635 DDX43P3-201ENST00000441064 443 ntBASIC16.95■□□□□ 0.3
TRIM38O00635 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM38O00635 CEND1P1-201ENST00000451006 455 ntBASIC16.95■□□□□ 0.3
TRIM38O00635 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM38O00635 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM38O00635 AC096734.2-201ENST00000562054 433 ntBASIC16.95■□□□□ 0.3
TRIM38O00635 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM38O00635 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM38O00635 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 ELL2P1-201ENST00000413990 1906 ntBASIC16.95■□□□□ 0.3
TRIM38O00635 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM38O00635 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM38O00635 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM38O00635 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM38O00635 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM38O00635 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM38O00635 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRIM38O00635 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM38O00635 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM38O00635 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM38O00635 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM38O00635 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms