Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 NEK4P2-201ENST00000580004 1012 ntBASIC12.35□□□□□ -0.43
SMKR1H3BMG3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 AL596087.1-201ENST00000400979 1969 ntBASIC12.35□□□□□ -0.43
SMKR1H3BMG3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.35□□□□□ -0.43
SMKR1H3BMG3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 GPR89P-201ENST00000407924 1495 ntBASIC12.34□□□□□ -0.43
SMKR1H3BMG3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.34□□□□□ -0.43
SMKR1H3BMG3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 AC233702.5-201ENST00000584107 538 ntBASIC12.34□□□□□ -0.43
SMKR1H3BMG3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 PRAL-201ENST00000624952 3286 ntBASIC12.34□□□□□ -0.43
SMKR1H3BMG3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 AL391807.1-203ENST00000604392 2365 ntBASIC12.34□□□□□ -0.43
SMKR1H3BMG3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SMKR1H3BMG3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms