Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
RGPD3A6NKT7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 AP001889.1-201ENST00000525414 633 ntBASIC20.85■□□□□ 0.93
RGPD3A6NKT7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 AL118558.3-201ENST00000607414 1079 ntBASIC20.85■□□□□ 0.93
RGPD3A6NKT7 AC005695.3-201ENST00000614522 232 ntBASIC20.85■□□□□ 0.93
RGPD3A6NKT7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 SOCS2P1-201ENST00000417727 557 ntBASIC20.85■□□□□ 0.93
RGPD3A6NKT7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 AC012441.1-201ENST00000446669 685 ntBASIC20.85■□□□□ 0.93
RGPD3A6NKT7 AL139010.1-201ENST00000454878 894 ntBASIC20.85■□□□□ 0.93
RGPD3A6NKT7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RGPD3A6NKT7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 AL589702.1-201ENST00000641229 1509 ntBASIC20.84■□□□□ 0.93
RGPD3A6NKT7 BCRP2-202ENST00000447763 634 ntBASIC20.84■□□□□ 0.93
RGPD3A6NKT7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 BCRP6-201ENST00000510112 632 ntBASIC20.84■□□□□ 0.93
RGPD3A6NKT7 BCRP7-201ENST00000511549 544 ntBASIC20.84■□□□□ 0.93
RGPD3A6NKT7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 KRT8P37-201ENST00000451609 1420 ntBASIC20.84■□□□□ 0.93
RGPD3A6NKT7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RGPD3A6NKT7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 AL049840.4-201ENST00000602422 811 ntBASIC20.83■□□□□ 0.93
RGPD3A6NKT7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RGPD3A6NKT7 SNX33P1-201ENST00000592116 1762 ntBASIC20.83■□□□□ 0.93
RGPD3A6NKT7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
RGPD3A6NKT7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RGPD3A6NKT7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RGPD3A6NKT7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RGPD3A6NKT7 HINT2P1-201ENST00000419438 481 ntBASIC20.82■□□□□ 0.92
RGPD3A6NKT7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.82■□□□□ 0.92
RGPD3A6NKT7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RGPD3A6NKT7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.82■□□□□ 0.92
RGPD3A6NKT7 AC016629.1-201ENST00000596579 586 ntBASIC20.82■□□□□ 0.92
RGPD3A6NKT7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RGPD3A6NKT7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC20.82■□□□□ 0.92
RGPD3A6NKT7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.82■□□□□ 0.92
RGPD3A6NKT7 SNX1-214ENST00000625244 324 ntTSL 5 BASIC20.82■□□□□ 0.92
RGPD3A6NKT7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RGPD3A6NKT7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RGPD3A6NKT7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.82■□□□□ 0.92
RGPD3A6NKT7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.82■□□□□ 0.92
RGPD3A6NKT7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms