Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 KRT18P34-201ENST00000488218 1270 ntBASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 IGHV3-42-201ENST00000520410 361 ntBASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 AL138918.1-201ENST00000568306 659 ntBASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3BA6NDS4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3BA6NDS4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3BA6NDS4 AC108860.2-201ENST00000562760 2183 ntBASIC17.02■□□□□ 0.31
TBC1D3BA6NDS4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3BA6NDS4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3BA6NDS4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TBC1D3BA6NDS4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
TBC1D3BA6NDS4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3BA6NDS4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3BA6NDS4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3BA6NDS4 FO538757.1-201ENST00000623083 1397 ntBASIC17.02■□□□□ 0.31
TBC1D3BA6NDS4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3BA6NDS4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 TREML5P-201ENST00000421694 576 ntBASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 AC138761.1-201ENST00000584393 385 ntBASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.01■□□□□ 0.31
TBC1D3BA6NDS4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 TUBB8P12-201ENST00000308911 1335 ntBASIC17■□□□□ 0.31
TBC1D3BA6NDS4 TUBB7P-202ENST00000428444 1305 ntBASIC17■□□□□ 0.31
TBC1D3BA6NDS4 TUBB8P7-204ENST00000567960 1332 ntBASIC17■□□□□ 0.31
TBC1D3BA6NDS4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17■□□□□ 0.31
TBC1D3BA6NDS4 COX20P2-201ENST00000452636 358 ntBASIC17■□□□□ 0.31
TBC1D3BA6NDS4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms