Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 BANF1P1-201ENST00000553684 263 ntBASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 AC105021.1-202ENST00000570572 669 ntBASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.45■□□□□ 0.38
HCFC2Q9Y5Z7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 AC098614.1-201ENST00000368528 745 ntBASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 GPR53P-205ENST00000457298 1084 ntBASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC2Q9Y5Z7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 NOC2LP1-202ENST00000452600 2235 ntBASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 AC134043.2-201ENST00000624206 2238 ntBASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 IGHV3-71-201ENST00000523324 359 ntBASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 AC135586.1-201ENST00000539323 574 ntBASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 AL133215.2-201ENST00000609242 977 ntBASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCFC2Q9Y5Z7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.42■□□□□ 0.38
HCFC2Q9Y5Z7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms