Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 AP003733.1-201ENST00000491725 852 ntBASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 AC079602.3-201ENST00000623931 403 ntBASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 AL353692.3-201ENST00000407031 1396 ntBASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 DBET-201ENST00000630918 3363 ntBASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 AC117947.1-201ENST00000427448 529 ntBASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB1Q9Y5G3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 HLA-J-202ENST00000469281 1241 ntBASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 ZNF444P1-201ENST00000559497 298 ntBASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGB1Q9Y5G3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms