Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.07■□□□□ 0.32
HACD3Q9P035 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.07■□□□□ 0.32
HACD3Q9P035 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.07■□□□□ 0.32
HACD3Q9P035 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.07■□□□□ 0.32
HACD3Q9P035 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.07■□□□□ 0.32
HACD3Q9P035 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
HACD3Q9P035 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HACD3Q9P035 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HACD3Q9P035 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HACD3Q9P035 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
HACD3Q9P035 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.07■□□□□ 0.32
HACD3Q9P035 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
HACD3Q9P035 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HACD3Q9P035 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.07■□□□□ 0.32
HACD3Q9P035 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HACD3Q9P035 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HACD3Q9P035 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.06■□□□□ 0.32
HACD3Q9P035 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 HLA-A-201ENST00000376802 1334 ntBASIC17.06■□□□□ 0.32
HACD3Q9P035 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.06■□□□□ 0.32
HACD3Q9P035 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
HACD3Q9P035 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HACD3Q9P035 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.06■□□□□ 0.32
HACD3Q9P035 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HACD3Q9P035 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.06■□□□□ 0.32
HACD3Q9P035 AC092910.1-201ENST00000482027 1129 ntBASIC17.06■□□□□ 0.32
HACD3Q9P035 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HACD3Q9P035 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.06■□□□□ 0.32
HACD3Q9P035 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HACD3Q9P035 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.06■□□□□ 0.32
HACD3Q9P035 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
HACD3Q9P035 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.06■□□□□ 0.32
HACD3Q9P035 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.06■□□□□ 0.32
HACD3Q9P035 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HACD3Q9P035 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.06■□□□□ 0.32
HACD3Q9P035 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
HACD3Q9P035 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.05■□□□□ 0.32
HACD3Q9P035 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.05■□□□□ 0.32
HACD3Q9P035 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.05■□□□□ 0.32
HACD3Q9P035 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 MRPL20P1-201ENST00000400819 433 ntBASIC17.05■□□□□ 0.32
HACD3Q9P035 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.05■□□□□ 0.32
HACD3Q9P035 AC098831.1-202ENST00000438821 336 ntBASIC17.05■□□□□ 0.32
HACD3Q9P035 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.05■□□□□ 0.32
HACD3Q9P035 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.05■□□□□ 0.32
HACD3Q9P035 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.05■□□□□ 0.32
HACD3Q9P035 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.05■□□□□ 0.32
HACD3Q9P035 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.05■□□□□ 0.32
HACD3Q9P035 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HACD3Q9P035 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.05■□□□□ 0.32
HACD3Q9P035 AL049840.3-201ENST00000602669 611 ntBASIC17.05■□□□□ 0.32
HACD3Q9P035 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HACD3Q9P035 AC116407.3-201ENST00000623905 1129 ntBASIC17.05■□□□□ 0.32
HACD3Q9P035 AC117500.6-201ENST00000624871 588 ntBASIC17.05■□□□□ 0.32
HACD3Q9P035 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.05■□□□□ 0.32
HACD3Q9P035 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.05■□□□□ 0.32
HACD3Q9P035 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.05■□□□□ 0.32
HACD3Q9P035 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.05■□□□□ 0.32
HACD3Q9P035 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.05■□□□□ 0.32
HACD3Q9P035 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HACD3Q9P035 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.05■□□□□ 0.32
HACD3Q9P035 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms