Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 POM121L3P-201ENST00000419331 1163 ntBASIC16.63■□□□□ 0.25
MKS1Q9NXB0 ABCD1P5-201ENST00000445663 754 ntBASIC16.63■□□□□ 0.25
MKS1Q9NXB0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 DUX4L26-201ENST00000489078 1255 ntBASIC16.63■□□□□ 0.25
MKS1Q9NXB0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 MPDU1-223ENST00000582151 728 ntBASIC16.63■□□□□ 0.25
MKS1Q9NXB0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 AL121956.5-201ENST00000625261 221 ntBASIC16.63■□□□□ 0.25
MKS1Q9NXB0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 PKD1P1-201ENST00000458669 6805 ntBASIC16.63■□□□□ 0.25
MKS1Q9NXB0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.63■□□□□ 0.25
MKS1Q9NXB0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 OR6D1P-203ENST00000641209 4860 ntBASIC16.62■□□□□ 0.25
MKS1Q9NXB0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.62■□□□□ 0.25
MKS1Q9NXB0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 PRYP5-201ENST00000451909 266 ntBASIC16.62■□□□□ 0.25
MKS1Q9NXB0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 AC068418.2-201ENST00000577309 3703 ntBASIC16.62■□□□□ 0.25
MKS1Q9NXB0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MKS1Q9NXB0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MKS1Q9NXB0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms