Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 BCAR1-209ENST00000546196 1340 ntBASIC17.94■□□□□ 0.46
CISHQ9NSE2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.94■□□□□ 0.46
CISHQ9NSE2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CISHQ9NSE2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CISHQ9NSE2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CISHQ9NSE2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CISHQ9NSE2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CISHQ9NSE2 AC025580.3-201ENST00000617932 1424 ntBASIC17.93■□□□□ 0.46
CISHQ9NSE2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CISHQ9NSE2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 KRT18P58-201ENST00000527480 1120 ntBASIC17.93■□□□□ 0.46
CISHQ9NSE2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 AL031432.2-201ENST00000566714 459 ntBASIC17.93■□□□□ 0.46
CISHQ9NSE2 AL928711.1-201ENST00000570165 459 ntBASIC17.93■□□□□ 0.46
CISHQ9NSE2 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.93■□□□□ 0.46
CISHQ9NSE2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CISHQ9NSE2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CISHQ9NSE2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CISHQ9NSE2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 AC006538.1-201ENST00000567905 1585 ntBASIC17.92■□□□□ 0.46
CISHQ9NSE2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.92■□□□□ 0.46
CISHQ9NSE2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.92■□□□□ 0.46
CISHQ9NSE2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.92■□□□□ 0.46
CISHQ9NSE2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CISHQ9NSE2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CISHQ9NSE2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.92■□□□□ 0.46
CISHQ9NSE2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.92■□□□□ 0.46
CISHQ9NSE2 POLD2P1-201ENST00000511220 997 ntBASIC17.92■□□□□ 0.46
CISHQ9NSE2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.92■□□□□ 0.46
CISHQ9NSE2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 KRT19P2-202ENST00000557173 1012 ntBASIC17.92■□□□□ 0.46
CISHQ9NSE2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.92■□□□□ 0.46
CISHQ9NSE2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.92■□□□□ 0.46
CISHQ9NSE2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.92■□□□□ 0.46
CISHQ9NSE2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.92■□□□□ 0.46
CISHQ9NSE2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CISHQ9NSE2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CISHQ9NSE2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.91■□□□□ 0.46
CISHQ9NSE2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CISHQ9NSE2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.91■□□□□ 0.46
CISHQ9NSE2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.91■□□□□ 0.46
CISHQ9NSE2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.91■□□□□ 0.46
CISHQ9NSE2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CISHQ9NSE2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.91■□□□□ 0.46
CISHQ9NSE2 KRT8P39-201ENST00000396270 1433 ntBASIC17.91■□□□□ 0.46
CISHQ9NSE2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CISHQ9NSE2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.91■□□□□ 0.46
CISHQ9NSE2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CISHQ9NSE2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CISHQ9NSE2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CISHQ9NSE2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.91■□□□□ 0.46
CISHQ9NSE2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CISHQ9NSE2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CISHQ9NSE2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CISHQ9NSE2 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.91■□□□□ 0.46
CISHQ9NSE2 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.91■□□□□ 0.46
CISHQ9NSE2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CISHQ9NSE2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.91■□□□□ 0.46
CISHQ9NSE2 HLA-J-202ENST00000469281 1241 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms