Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 AC079776.4-201ENST00000511039 504 ntBASIC19.15■□□□□ 0.66
CCDC94Q9BW85 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 AP001005.1-201ENST00000571755 1248 ntBASIC19.15■□□□□ 0.66
CCDC94Q9BW85 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 AL353593.2-201ENST00000602529 1483 ntBASIC19.15■□□□□ 0.66
CCDC94Q9BW85 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC94Q9BW85 AL049757.1-201ENST00000616842 1596 ntBASIC19.15■□□□□ 0.66
CCDC94Q9BW85 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC94Q9BW85 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC94Q9BW85 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC94Q9BW85 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC94Q9BW85 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC94Q9BW85 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 AC018712.1-201ENST00000455767 687 ntBASIC19.14■□□□□ 0.65
CCDC94Q9BW85 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 AC021087.4-201ENST00000563761 564 ntBASIC19.14■□□□□ 0.65
CCDC94Q9BW85 AC109462.3-201ENST00000573934 613 ntBASIC19.14■□□□□ 0.65
CCDC94Q9BW85 NKAPP1-205ENST00000585790 367 ntBASIC19.14■□□□□ 0.65
CCDC94Q9BW85 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 HLA-A-201ENST00000376802 1334 ntBASIC19.14■□□□□ 0.65
CCDC94Q9BW85 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 AC079776.2-201ENST00000641154 1609 ntBASIC19.14■□□□□ 0.65
CCDC94Q9BW85 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC94Q9BW85 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 AL031284.1-201ENST00000419297 478 ntBASIC19.13■□□□□ 0.65
CCDC94Q9BW85 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 IGHV3-52-201ENST00000519770 353 ntBASIC19.13■□□□□ 0.65
CCDC94Q9BW85 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 AC019129.2-201ENST00000609837 1235 ntBASIC19.13■□□□□ 0.65
CCDC94Q9BW85 AC148477.8-201ENST00000624298 468 ntBASIC19.13■□□□□ 0.65
CCDC94Q9BW85 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 AC092384.3-202ENST00000564646 2873 ntBASIC19.13■□□□□ 0.65
CCDC94Q9BW85 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC94Q9BW85 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms