Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPRD1AQ96P16 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 CROCCP1-201ENST00000426910 5675 ntBASIC17.32■□□□□ 0.36
RPRD1AQ96P16 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 RPSAP43-201ENST00000402237 625 ntBASIC17.32■□□□□ 0.36
RPRD1AQ96P16 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.32■□□□□ 0.36
RPRD1AQ96P16 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 AC112482.1-201ENST00000492080 688 ntBASIC17.32■□□□□ 0.36
RPRD1AQ96P16 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 MIR4492-201ENST00000581627 80 ntBASIC17.32■□□□□ 0.36
RPRD1AQ96P16 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 C20orf181-201ENST00000623918 480 ntBASIC17.32■□□□□ 0.36
RPRD1AQ96P16 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 AC006277.1-201ENST00000624348 1610 ntBASIC17.32■□□□□ 0.36
RPRD1AQ96P16 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.32■□□□□ 0.36
RPRD1AQ96P16 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 AC105020.1-201ENST00000435356 2205 ntBASIC17.31■□□□□ 0.36
RPRD1AQ96P16 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 MIR1233-2-201ENST00000408138 82 ntBASIC17.31■□□□□ 0.36
RPRD1AQ96P16 MIR1233-1-201ENST00000408722 82 ntBASIC17.31■□□□□ 0.36
RPRD1AQ96P16 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 FAM58CP-201ENST00000435741 640 ntBASIC17.31■□□□□ 0.36
RPRD1AQ96P16 ALG1L5P-201ENST00000482043 771 ntBASIC17.31■□□□□ 0.36
RPRD1AQ96P16 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.31■□□□□ 0.36
RPRD1AQ96P16 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 AC091812.2-201ENST00000619081 385 ntBASIC17.31■□□□□ 0.36
RPRD1AQ96P16 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 AL391256.1-201ENST00000443260 1855 ntBASIC17.31■□□□□ 0.36
RPRD1AQ96P16 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPRD1AQ96P16 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 LINC00895-201ENST00000629028 1637 ntBASIC17.3■□□□□ 0.36
RPRD1AQ96P16 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.3■□□□□ 0.36
RPRD1AQ96P16 HTR5BP-201ENST00000430851 1154 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms