Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 AC013268.4-201ENST00000637413 2228 ntBASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 SLC25A3P1-201ENST00000443844 931 ntBASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 AC073912.3-201ENST00000624414 853 ntBASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHMP6Q96FZ7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 CD70-202ENST00000423145 881 ntTSL 2 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 IGHV3-52-201ENST00000519770 353 ntBASIC17■□□□□ 0.31
CHMP6Q96FZ7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 AC024563.2-201ENST00000603282 481 ntBASIC17■□□□□ 0.31
CHMP6Q96FZ7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHMP6Q96FZ7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17■□□□□ 0.31
CHMP6Q96FZ7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 GPR89P-201ENST00000407924 1495 ntBASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 COX5BP2-201ENST00000392354 334 ntBASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 HLA-J-202ENST00000469281 1241 ntBASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.99■□□□□ 0.31
CHMP6Q96FZ7 AL023973.1-201ENST00000624619 620 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms