Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 BNIP3P18-201ENST00000593976 575 ntBASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RTN4IP1Q8WWV3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 AP002490.2-201ENST00000524791 560 ntBASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 AC111152.3-201ENST00000569699 673 ntBASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 HLA-A-202ENST00000376806 1854 ntBASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RTN4IP1Q8WWV3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 AL049757.1-201ENST00000616842 1596 ntBASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms