Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AL391256.1-201ENST00000443260 1855 ntBASIC16.27■□□□□ 0.2
KRT78Q8N1N4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 AC129492.6-201ENST00000611383 1305 ntBASIC16.27■□□□□ 0.2
KRT78Q8N1N4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.27■□□□□ 0.19
KRT78Q8N1N4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.27■□□□□ 0.19
KRT78Q8N1N4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
KRT78Q8N1N4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
KRT78Q8N1N4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.27■□□□□ 0.19
KRT78Q8N1N4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.27■□□□□ 0.19
KRT78Q8N1N4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
KRT78Q8N1N4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
KRT78Q8N1N4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT78Q8N1N4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT78Q8N1N4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.27■□□□□ 0.19
KRT78Q8N1N4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT78Q8N1N4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 MRPL3P1-201ENST00000400109 1033 ntBASIC16.26■□□□□ 0.19
KRT78Q8N1N4 MRPL20P1-201ENST00000400819 433 ntBASIC16.26■□□□□ 0.19
KRT78Q8N1N4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 SLC25A6P2-201ENST00000497974 877 ntBASIC16.26■□□□□ 0.19
KRT78Q8N1N4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 AC078925.2-201ENST00000624013 1973 ntBASIC16.26■□□□□ 0.19
KRT78Q8N1N4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.26■□□□□ 0.19
KRT78Q8N1N4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT78Q8N1N4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms