Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 AP002490.2-201ENST00000524791 560 ntBASIC15.37■□□□□ 0.05
NIPAL3Q6P499 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 MTDHP4-201ENST00000600287 670 ntBASIC15.37■□□□□ 0.05
NIPAL3Q6P499 AL121912.1-201ENST00000603683 238 ntBASIC15.37■□□□□ 0.05
NIPAL3Q6P499 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NIPAL3Q6P499 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 AC008741.2-201ENST00000612792 3115 ntBASIC15.36■□□□□ 0.05
NIPAL3Q6P499 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 PRYP5-201ENST00000451909 266 ntBASIC15.36■□□□□ 0.05
NIPAL3Q6P499 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 AC073648.2-201ENST00000510116 352 ntBASIC15.36■□□□□ 0.05
NIPAL3Q6P499 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 AL513523.2-202ENST00000427283 2040 ntBASIC15.36■□□□□ 0.05
NIPAL3Q6P499 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NIPAL3Q6P499 AL162727.3-201ENST00000635661 2787 ntBASIC15.36■□□□□ 0.05
NIPAL3Q6P499 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.35■□□□□ 0.05
NIPAL3Q6P499 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NIPAL3Q6P499 FAAHP1-202ENST00000446499 1238 ntBASIC15.35■□□□□ 0.05
NIPAL3Q6P499 AC079781.3-201ENST00000449110 356 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms