Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.06■□□□□ 0
H3F3AP84243 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.06■□□□□ 0
H3F3AP84243 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.06■□□□□ 0
H3F3AP84243 AC010507.1-201ENST00000633895 436 ntBASIC15.06■□□□□ 0
H3F3AP84243 AL139384.1-201ENST00000612143 3047 ntBASIC15.06■□□□□ 0
H3F3AP84243 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.06■□□□□ 0
H3F3AP84243 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
H3F3AP84243 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
H3F3AP84243 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.06■□□□□ 0
H3F3AP84243 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
H3F3AP84243 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
H3F3AP84243 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.06■□□□□ 0
H3F3AP84243 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.06■□□□□ 0
H3F3AP84243 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.06■□□□□ 0
H3F3AP84243 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
H3F3AP84243 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
H3F3AP84243 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
H3F3AP84243 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.05■□□□□ 0
H3F3AP84243 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.05■□□□□ 0
H3F3AP84243 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
H3F3AP84243 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
H3F3AP84243 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
H3F3AP84243 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.05■□□□□ -0
H3F3AP84243 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 MIR574-201ENST00000385209 96 ntBASIC15.05■□□□□ -0
H3F3AP84243 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.05■□□□□ -0
H3F3AP84243 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 AC007967.2-201ENST00000432613 625 ntBASIC15.05■□□□□ -0
H3F3AP84243 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.05■□□□□ -0
H3F3AP84243 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.05■□□□□ -0
H3F3AP84243 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 AC087641.1-201ENST00000557561 1021 ntBASIC15.05■□□□□ -0
H3F3AP84243 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.05■□□□□ -0
H3F3AP84243 MIR4515-201ENST00000584082 81 ntBASIC15.05■□□□□ -0
H3F3AP84243 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.05■□□□□ -0
H3F3AP84243 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 CROCCP1-201ENST00000426910 5675 ntBASIC15.05■□□□□ -0
H3F3AP84243 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.05■□□□□ -0
H3F3AP84243 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
H3F3AP84243 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
H3F3AP84243 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
H3F3AP84243 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.04■□□□□ -0
H3F3AP84243 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
H3F3AP84243 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.04■□□□□ -0
H3F3AP84243 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
H3F3AP84243 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 PKD1P5-201ENST00000532415 10291 ntBASIC15.04■□□□□ -0
H3F3AP84243 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.04■□□□□ -0
H3F3AP84243 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.04■□□□□ -0
H3F3AP84243 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.04■□□□□ -0
H3F3AP84243 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.04■□□□□ -0
H3F3AP84243 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.04■□□□□ -0
H3F3AP84243 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.04■□□□□ -0
H3F3AP84243 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.04■□□□□ -0
H3F3AP84243 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
H3F3AP84243 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
H3F3AP84243 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.04■□□□□ -0
H3F3AP84243 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.04■□□□□ -0
H3F3AP84243 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.04■□□□□ -0
H3F3AP84243 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.04■□□□□ -0
H3F3AP84243 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.04■□□□□ -0
H3F3AP84243 AC140113.2-201ENST00000604370 208 ntBASIC15.04■□□□□ -0
H3F3AP84243 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.04■□□□□ -0
H3F3AP84243 AL645728.2-201ENST00000641974 660 ntBASIC15.04■□□□□ -0
H3F3AP84243 NFIC-211ENST00000641145 8399 ntBASIC15.04■□□□□ -0
H3F3AP84243 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3F3AP84243 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms