Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.96■□□□□ 0.15
RAE1P78406 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAE1P78406 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAE1P78406 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAE1P78406 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RAE1P78406 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAE1P78406 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.95■□□□□ 0.14
RAE1P78406 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.95■□□□□ 0.14
RAE1P78406 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RAE1P78406 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.95■□□□□ 0.14
RAE1P78406 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 AL450487.1-201ENST00000426799 995 ntBASIC15.95■□□□□ 0.14
RAE1P78406 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 AC108073.2-201ENST00000464002 357 ntBASIC15.95■□□□□ 0.14
RAE1P78406 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.95■□□□□ 0.14
RAE1P78406 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RAE1P78406 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.95■□□□□ 0.14
RAE1P78406 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.95■□□□□ 0.14
RAE1P78406 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAE1P78406 AC117500.6-201ENST00000624871 588 ntBASIC15.95■□□□□ 0.14
RAE1P78406 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.95■□□□□ 0.14
RAE1P78406 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAE1P78406 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.95■□□□□ 0.14
RAE1P78406 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.95■□□□□ 0.14
RAE1P78406 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.94■□□□□ 0.14
RAE1P78406 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAE1P78406 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RAE1P78406 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAE1P78406 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RAE1P78406 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.94■□□□□ 0.14
RAE1P78406 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAE1P78406 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.94■□□□□ 0.14
RAE1P78406 AP002469.2-201ENST00000531724 424 ntBASIC15.94■□□□□ 0.14
RAE1P78406 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.94■□□□□ 0.14
RAE1P78406 AC005412.3-201ENST00000580309 715 ntBASIC15.94■□□□□ 0.14
RAE1P78406 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 MIR7706-201ENST00000613747 67 ntBASIC15.94■□□□□ 0.14
RAE1P78406 AC004790.2-201ENST00000623588 572 ntBASIC15.94■□□□□ 0.14
RAE1P78406 AC005593.1-201ENST00000624894 515 ntBASIC15.94■□□□□ 0.14
RAE1P78406 PGM5P2-202ENST00000637225 1043 ntBASIC15.94■□□□□ 0.14
RAE1P78406 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.94■□□□□ 0.14
RAE1P78406 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAE1P78406 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAE1P78406 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAE1P78406 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.94■□□□□ 0.14
RAE1P78406 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAE1P78406 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAE1P78406 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAE1P78406 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAE1P78406 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.94■□□□□ 0.14
RAE1P78406 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms