Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
UBA52P62987 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.62□□□□□ -0.07
UBA52P62987 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.62□□□□□ -0.07
UBA52P62987 AF186996.4-201ENST00000467186 377 ntBASIC14.62□□□□□ -0.07
UBA52P62987 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.62□□□□□ -0.07
UBA52P62987 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.62□□□□□ -0.07
UBA52P62987 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.62□□□□□ -0.07
UBA52P62987 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.62□□□□□ -0.07
UBA52P62987 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.62□□□□□ -0.07
UBA52P62987 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.62□□□□□ -0.07
UBA52P62987 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.62□□□□□ -0.07
UBA52P62987 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.62□□□□□ -0.07
UBA52P62987 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.62□□□□□ -0.07
UBA52P62987 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.62□□□□□ -0.07
UBA52P62987 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.62□□□□□ -0.07
UBA52P62987 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 AC104640.1-201ENST00000562617 2109 ntBASIC14.62□□□□□ -0.07
UBA52P62987 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.62□□□□□ -0.07
UBA52P62987 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.62□□□□□ -0.07
UBA52P62987 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBA52P62987 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
UBA52P62987 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.61□□□□□ -0.07
UBA52P62987 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
UBA52P62987 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.61□□□□□ -0.07
UBA52P62987 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
UBA52P62987 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.61□□□□□ -0.07
UBA52P62987 MIR574-201ENST00000385209 96 ntBASIC14.61□□□□□ -0.07
UBA52P62987 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
UBA52P62987 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 AL031284.1-201ENST00000419297 478 ntBASIC14.61□□□□□ -0.07
UBA52P62987 KRT18P67-201ENST00000432816 1264 ntBASIC14.61□□□□□ -0.07
UBA52P62987 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.61□□□□□ -0.07
UBA52P62987 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.61□□□□□ -0.07
UBA52P62987 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 AC096582.2-201ENST00000510860 516 ntBASIC14.61□□□□□ -0.07
UBA52P62987 RNA5SP419-201ENST00000515908 135 ntBASIC14.61□□□□□ -0.07
UBA52P62987 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.61□□□□□ -0.07
UBA52P62987 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.61□□□□□ -0.07
UBA52P62987 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.61□□□□□ -0.07
UBA52P62987 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.61□□□□□ -0.07
UBA52P62987 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.61□□□□□ -0.07
UBA52P62987 BNIP3P18-201ENST00000593976 575 ntBASIC14.61□□□□□ -0.07
UBA52P62987 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.61□□□□□ -0.07
UBA52P62987 AC139530.3-201ENST00000620344 690 ntBASIC14.61□□□□□ -0.07
UBA52P62987 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.61□□□□□ -0.07
UBA52P62987 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBA52P62987 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
UBA52P62987 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.6□□□□□ -0.07
UBA52P62987 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.6□□□□□ -0.07
UBA52P62987 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.6□□□□□ -0.07
UBA52P62987 AC093909.1-201ENST00000504731 1122 ntBASIC14.6□□□□□ -0.07
UBA52P62987 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.6□□□□□ -0.07
UBA52P62987 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
UBA52P62987 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.6□□□□□ -0.07
UBA52P62987 MIR5100-201ENST00000579544 119 ntBASIC14.6□□□□□ -0.07
UBA52P62987 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
UBA52P62987 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
UBA52P62987 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBA52P62987 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms