Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
EPHA4P54764 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.18■□□□□ 0.18
EPHA4P54764 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.18■□□□□ 0.18
EPHA4P54764 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
EPHA4P54764 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.18■□□□□ 0.18
EPHA4P54764 SPCS2P4-201ENST00000436160 681 ntBASIC16.18■□□□□ 0.18
EPHA4P54764 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
EPHA4P54764 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
EPHA4P54764 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.18■□□□□ 0.18
EPHA4P54764 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
EPHA4P54764 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.18■□□□□ 0.18
EPHA4P54764 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.18■□□□□ 0.18
EPHA4P54764 AC015911.4-201ENST00000588022 1070 ntBASIC16.18■□□□□ 0.18
EPHA4P54764 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
EPHA4P54764 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
EPHA4P54764 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.18■□□□□ 0.18
EPHA4P54764 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.18■□□□□ 0.18
EPHA4P54764 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.18■□□□□ 0.18
EPHA4P54764 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
EPHA4P54764 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.17■□□□□ 0.18
EPHA4P54764 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
EPHA4P54764 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.17■□□□□ 0.18
EPHA4P54764 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
EPHA4P54764 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
EPHA4P54764 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
EPHA4P54764 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
EPHA4P54764 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.17■□□□□ 0.18
EPHA4P54764 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.17■□□□□ 0.18
EPHA4P54764 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.17■□□□□ 0.18
EPHA4P54764 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
EPHA4P54764 AC069335.1-201ENST00000489972 472 ntBASIC16.17■□□□□ 0.18
EPHA4P54764 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.17■□□□□ 0.18
EPHA4P54764 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
EPHA4P54764 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.17■□□□□ 0.18
EPHA4P54764 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.17■□□□□ 0.18
EPHA4P54764 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.17■□□□□ 0.18
EPHA4P54764 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
EPHA4P54764 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.17■□□□□ 0.18
EPHA4P54764 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
EPHA4P54764 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.17■□□□□ 0.18
EPHA4P54764 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.17■□□□□ 0.18
EPHA4P54764 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.17■□□□□ 0.18
EPHA4P54764 AC084121.4-201ENST00000641598 221 ntBASIC16.17■□□□□ 0.18
EPHA4P54764 AF228730.8-201ENST00000642140 221 ntBASIC16.17■□□□□ 0.18
EPHA4P54764 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.17■□□□□ 0.18
EPHA4P54764 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.17■□□□□ 0.18
EPHA4P54764 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
EPHA4P54764 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
EPHA4P54764 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
EPHA4P54764 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EPHA4P54764 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
EPHA4P54764 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
EPHA4P54764 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.16■□□□□ 0.18
EPHA4P54764 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.16■□□□□ 0.18
EPHA4P54764 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms