Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB4P54760 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB4P54760 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB4P54760 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB4P54760 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
EPHB4P54760 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
EPHB4P54760 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB4P54760 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
EPHB4P54760 AL513480.1-201ENST00000451731 511 ntBASIC18.94■□□□□ 0.62
EPHB4P54760 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.94■□□□□ 0.62
EPHB4P54760 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
EPHB4P54760 LINC02560-201ENST00000596379 459 ntBASIC18.94■□□□□ 0.62
EPHB4P54760 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.94■□□□□ 0.62
EPHB4P54760 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
EPHB4P54760 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHB4P54760 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.94■□□□□ 0.62
EPHB4P54760 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB4P54760 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB4P54760 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
EPHB4P54760 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB4P54760 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB4P54760 TUBB3P1-201ENST00000405796 1332 ntBASIC18.94■□□□□ 0.62
EPHB4P54760 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHB4P54760 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB4P54760 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
EPHB4P54760 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.94■□□□□ 0.62
EPHB4P54760 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHB4P54760 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
EPHB4P54760 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EPHB4P54760 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
EPHB4P54760 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EPHB4P54760 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
EPHB4P54760 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
EPHB4P54760 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.93■□□□□ 0.62
EPHB4P54760 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHB4P54760 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EPHB4P54760 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.93■□□□□ 0.62
EPHB4P54760 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.93■□□□□ 0.62
EPHB4P54760 AL671277.1-201ENST00000429656 993 ntBASIC18.93■□□□□ 0.62
EPHB4P54760 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.93■□□□□ 0.62
EPHB4P54760 DUTP2-201ENST00000519164 463 ntBASIC18.93■□□□□ 0.62
EPHB4P54760 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.93■□□□□ 0.62
EPHB4P54760 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHB4P54760 AC008761.3-201ENST00000624803 892 ntBASIC18.93■□□□□ 0.62
EPHB4P54760 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
EPHB4P54760 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHB4P54760 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 AC100803.2-201ENST00000562459 1963 ntBASIC18.93■□□□□ 0.62
EPHB4P54760 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHB4P54760 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
EPHB4P54760 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.93■□□□□ 0.62
EPHB4P54760 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHB4P54760 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHB4P54760 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHB4P54760 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.92■□□□□ 0.62
EPHB4P54760 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.92■□□□□ 0.62
EPHB4P54760 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 PKD1P1-201ENST00000458669 6805 ntBASIC18.92■□□□□ 0.62
EPHB4P54760 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
EPHB4P54760 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms