Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.71■□□□□ 0.59
LBX1P52954 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
LBX1P52954 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.71■□□□□ 0.59
LBX1P52954 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
LBX1P52954 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
LBX1P52954 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.71■□□□□ 0.58
LBX1P52954 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LBX1P52954 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.7■□□□□ 0.58
LBX1P52954 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LBX1P52954 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
LBX1P52954 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.7■□□□□ 0.58
LBX1P52954 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LBX1P52954 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LBX1P52954 MAGEA5-201ENST00000446757 942 ntBASIC18.7■□□□□ 0.58
LBX1P52954 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.7■□□□□ 0.58
LBX1P52954 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.7■□□□□ 0.58
LBX1P52954 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.7■□□□□ 0.58
LBX1P52954 AC005695.3-201ENST00000614522 232 ntBASIC18.7■□□□□ 0.58
LBX1P52954 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
LBX1P52954 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.7■□□□□ 0.58
LBX1P52954 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.7■□□□□ 0.58
LBX1P52954 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 REXO1L11P-201ENST00000620964 1927 ntBASIC18.7■□□□□ 0.58
LBX1P52954 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LBX1P52954 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.7■□□□□ 0.58
LBX1P52954 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.69■□□□□ 0.58
LBX1P52954 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
LBX1P52954 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.69■□□□□ 0.58
LBX1P52954 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LBX1P52954 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LBX1P52954 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LBX1P52954 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.69■□□□□ 0.58
LBX1P52954 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.69■□□□□ 0.58
LBX1P52954 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.69■□□□□ 0.58
LBX1P52954 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.69■□□□□ 0.58
LBX1P52954 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.69■□□□□ 0.58
LBX1P52954 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.69■□□□□ 0.58
LBX1P52954 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.69■□□□□ 0.58
LBX1P52954 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.69■□□□□ 0.58
LBX1P52954 AP006547.1-201ENST00000563435 692 ntBASIC18.69■□□□□ 0.58
LBX1P52954 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.69■□□□□ 0.58
LBX1P52954 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.69■□□□□ 0.58
LBX1P52954 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.69■□□□□ 0.58
LBX1P52954 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.69■□□□□ 0.58
LBX1P52954 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.69■□□□□ 0.58
LBX1P52954 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.69■□□□□ 0.58
LBX1P52954 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.69■□□□□ 0.58
LBX1P52954 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.69■□□□□ 0.58
LBX1P52954 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.69■□□□□ 0.58
LBX1P52954 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LBX1P52954 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
LBX1P52954 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
LBX1P52954 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LBX1P52954 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.68■□□□□ 0.58
LBX1P52954 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.68■□□□□ 0.58
LBX1P52954 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LBX1P52954 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.68■□□□□ 0.58
LBX1P52954 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LBX1P52954 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.68■□□□□ 0.58
LBX1P52954 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LBX1P52954 AC245884.6-201ENST00000515672 1067 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms