Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.35■□□□□ 0.21
PDX1P52945 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.35■□□□□ 0.21
PDX1P52945 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 Z92544.3-201ENST00000624747 417 ntBASIC16.35■□□□□ 0.21
PDX1P52945 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PDX1P52945 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PDX1P52945 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PDX1P52945 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PDX1P52945 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.35■□□□□ 0.21
PDX1P52945 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.35■□□□□ 0.21
PDX1P52945 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.35■□□□□ 0.21
PDX1P52945 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDX1P52945 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PDX1P52945 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.34■□□□□ 0.21
PDX1P52945 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.34■□□□□ 0.21
PDX1P52945 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PDX1P52945 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.34■□□□□ 0.21
PDX1P52945 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.34■□□□□ 0.21
PDX1P52945 AC079140.1-201ENST00000508039 487 ntBASIC16.34■□□□□ 0.21
PDX1P52945 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.34■□□□□ 0.21
PDX1P52945 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.34■□□□□ 0.21
PDX1P52945 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.34■□□□□ 0.21
PDX1P52945 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.34■□□□□ 0.21
PDX1P52945 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.34■□□□□ 0.21
PDX1P52945 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.34■□□□□ 0.21
PDX1P52945 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.34■□□□□ 0.21
PDX1P52945 AL645728.2-201ENST00000641974 660 ntBASIC16.34■□□□□ 0.21
PDX1P52945 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PDX1P52945 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.34■□□□□ 0.21
PDX1P52945 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.34■□□□□ 0.21
PDX1P52945 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.34■□□□□ 0.21
PDX1P52945 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PDX1P52945 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDX1P52945 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PDX1P52945 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.34■□□□□ 0.21
PDX1P52945 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDX1P52945 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PDX1P52945 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PDX1P52945 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDX1P52945 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PDX1P52945 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDX1P52945 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.33■□□□□ 0.2
PDX1P52945 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.33■□□□□ 0.2
PDX1P52945 SPDYE11-202ENST00000450699 704 ntBASIC16.33■□□□□ 0.2
PDX1P52945 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.33■□□□□ 0.2
PDX1P52945 SPDYE9P-201ENST00000570642 692 ntBASIC16.33■□□□□ 0.2
PDX1P52945 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.33■□□□□ 0.2
PDX1P52945 SPDYE10P-202ENST00000612005 668 ntBASIC16.33■□□□□ 0.2
PDX1P52945 SPDYE8P-202ENST00000612377 668 ntBASIC16.33■□□□□ 0.2
PDX1P52945 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PDX1P52945 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.33■□□□□ 0.2
PDX1P52945 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.33■□□□□ 0.2
PDX1P52945 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PDX1P52945 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.33■□□□□ 0.2
PDX1P52945 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PDX1P52945 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PDX1P52945 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDX1P52945 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms