Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.97■□□□□ 0.63
USP11P51784 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.97■□□□□ 0.63
USP11P51784 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
USP11P51784 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.97■□□□□ 0.63
USP11P51784 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.97■□□□□ 0.63
USP11P51784 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.97■□□□□ 0.63
USP11P51784 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
USP11P51784 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
USP11P51784 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 AL512652.2-201ENST00000625156 1716 ntBASIC18.97■□□□□ 0.63
USP11P51784 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.97■□□□□ 0.63
USP11P51784 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP11P51784 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.96■□□□□ 0.63
USP11P51784 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
USP11P51784 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
USP11P51784 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.96■□□□□ 0.63
USP11P51784 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
USP11P51784 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.96■□□□□ 0.63
USP11P51784 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 ALG1L5P-201ENST00000482043 771 ntBASIC18.96■□□□□ 0.63
USP11P51784 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.96■□□□□ 0.63
USP11P51784 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
USP11P51784 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
USP11P51784 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.96■□□□□ 0.63
USP11P51784 AC099522.2-201ENST00000607001 744 ntBASIC18.96■□□□□ 0.63
USP11P51784 AL078644.1-201ENST00000609881 752 ntBASIC18.96■□□□□ 0.63
USP11P51784 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.96■□□□□ 0.63
USP11P51784 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.96■□□□□ 0.63
USP11P51784 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
USP11P51784 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 ELL2P1-201ENST00000413990 1906 ntBASIC18.96■□□□□ 0.63
USP11P51784 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP11P51784 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
USP11P51784 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.95■□□□□ 0.62
USP11P51784 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.95■□□□□ 0.62
USP11P51784 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USP11P51784 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.95■□□□□ 0.62
USP11P51784 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.95■□□□□ 0.62
USP11P51784 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.95■□□□□ 0.62
USP11P51784 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USP11P51784 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.95■□□□□ 0.62
USP11P51784 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
USP11P51784 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
USP11P51784 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
USP11P51784 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP11P51784 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP11P51784 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
USP11P51784 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
USP11P51784 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms