Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC5P40937 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC5P40937 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC5P40937 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RFC5P40937 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.53■□□□□ 0.56
RFC5P40937 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 TIMM8BP1-201ENST00000452384 211 ntBASIC18.53■□□□□ 0.56
RFC5P40937 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.53■□□□□ 0.56
RFC5P40937 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC5P40937 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.53■□□□□ 0.56
RFC5P40937 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.53■□□□□ 0.56
RFC5P40937 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.53■□□□□ 0.56
RFC5P40937 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RFC5P40937 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.53■□□□□ 0.56
RFC5P40937 AL135744.1-201ENST00000565098 629 ntBASIC18.53■□□□□ 0.56
RFC5P40937 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RFC5P40937 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.53■□□□□ 0.56
RFC5P40937 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.53■□□□□ 0.56
RFC5P40937 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RFC5P40937 AL139011.1-202ENST00000642063 584 ntBASIC18.53■□□□□ 0.56
RFC5P40937 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RFC5P40937 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RFC5P40937 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC5P40937 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.53■□□□□ 0.56
RFC5P40937 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC5P40937 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC5P40937 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC5P40937 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC5P40937 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RFC5P40937 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC5P40937 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.52■□□□□ 0.56
RFC5P40937 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC5P40937 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC5P40937 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.52■□□□□ 0.56
RFC5P40937 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.52■□□□□ 0.56
RFC5P40937 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC5P40937 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFC5P40937 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RFC5P40937 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.52■□□□□ 0.56
RFC5P40937 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.52■□□□□ 0.56
RFC5P40937 AC004461.1-201ENST00000412461 403 ntBASIC18.52■□□□□ 0.56
RFC5P40937 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.52■□□□□ 0.56
RFC5P40937 KRT8P48-201ENST00000515599 1220 ntBASIC18.52■□□□□ 0.56
RFC5P40937 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.52■□□□□ 0.56
RFC5P40937 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RFC5P40937 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.52■□□□□ 0.56
RFC5P40937 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.52■□□□□ 0.56
RFC5P40937 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.52■□□□□ 0.56
RFC5P40937 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC5P40937 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.52■□□□□ 0.56
RFC5P40937 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFC5P40937 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.52■□□□□ 0.56
RFC5P40937 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFC5P40937 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFC5P40937 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFC5P40937 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFC5P40937 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFC5P40937 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RFC5P40937 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RFC5P40937 AL391256.1-201ENST00000443260 1855 ntBASIC18.52■□□□□ 0.55
RFC5P40937 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFC5P40937 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
RFC5P40937 AC124067.4-201ENST00000519691 2379 ntBASIC18.52■□□□□ 0.55
RFC5P40937 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.52■□□□□ 0.55
RFC5P40937 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RFC5P40937 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFC5P40937 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC5P40937 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RFC5P40937 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.51■□□□□ 0.55
RFC5P40937 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFC5P40937 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC5P40937 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC5P40937 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RFC5P40937 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC5P40937 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RFC5P40937 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RFC5P40937 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFC5P40937 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC5P40937 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFC5P40937 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFC5P40937 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.51■□□□□ 0.55
RFC5P40937 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFC5P40937 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFC5P40937 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms