Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MIR3909-201ENST00000579518 119 ntBASIC16.74■□□□□ 0.27
HMGCLP35914 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HMGCLP35914 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HMGCLP35914 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
HMGCLP35914 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGCLP35914 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGCLP35914 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGCLP35914 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGCLP35914 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HMGCLP35914 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HMGCLP35914 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HMGCLP35914 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HMGCLP35914 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGCLP35914 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGCLP35914 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.73■□□□□ 0.27
HMGCLP35914 PGAM5P1-201ENST00000518923 814 ntBASIC16.73■□□□□ 0.27
HMGCLP35914 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.73■□□□□ 0.27
HMGCLP35914 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.73■□□□□ 0.27
HMGCLP35914 PDPK2P-202ENST00000562415 1191 ntBASIC16.73■□□□□ 0.27
HMGCLP35914 AC040169.1-201ENST00000565382 521 ntBASIC16.73■□□□□ 0.27
HMGCLP35914 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGCLP35914 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.73■□□□□ 0.27
HMGCLP35914 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGCLP35914 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HMGCLP35914 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
HMGCLP35914 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HMGCLP35914 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HMGCLP35914 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCLP35914 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGCLP35914 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HMGCLP35914 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HMGCLP35914 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGCLP35914 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCLP35914 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
HMGCLP35914 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 RNU1-129P-201ENST00000384064 167 ntBASIC16.72■□□□□ 0.27
HMGCLP35914 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCLP35914 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCLP35914 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCLP35914 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
HMGCLP35914 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.72■□□□□ 0.27
HMGCLP35914 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
HMGCLP35914 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCLP35914 U1.21-201ENST00000580816 167 ntBASIC16.72■□□□□ 0.27
HMGCLP35914 AL512652.2-201ENST00000625156 1716 ntBASIC16.72■□□□□ 0.27
HMGCLP35914 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
HMGCLP35914 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGCLP35914 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCLP35914 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCLP35914 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCLP35914 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HMGCLP35914 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms