Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.77■□□□□ 0.44
RFC1P35251 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RFC1P35251 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 RPS2P28-201ENST00000314255 741 ntBASIC17.77■□□□□ 0.44
RFC1P35251 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.77■□□□□ 0.44
RFC1P35251 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.77■□□□□ 0.44
RFC1P35251 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 AL031284.1-201ENST00000419297 478 ntBASIC17.77■□□□□ 0.44
RFC1P35251 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.77■□□□□ 0.44
RFC1P35251 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.77■□□□□ 0.44
RFC1P35251 RNA5SP419-201ENST00000515908 135 ntBASIC17.77■□□□□ 0.44
RFC1P35251 AP002490.2-201ENST00000524791 560 ntBASIC17.77■□□□□ 0.44
RFC1P35251 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
RFC1P35251 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.77■□□□□ 0.44
RFC1P35251 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.77■□□□□ 0.44
RFC1P35251 AC008667.4-201ENST00000607370 168 ntBASIC17.77■□□□□ 0.44
RFC1P35251 AL773604.1-201ENST00000617417 272 ntBASIC17.77■□□□□ 0.44
RFC1P35251 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.77■□□□□ 0.44
RFC1P35251 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.77■□□□□ 0.44
RFC1P35251 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 AC124067.4-201ENST00000519691 2379 ntBASIC17.77■□□□□ 0.44
RFC1P35251 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFC1P35251 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFC1P35251 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.77■□□□□ 0.43
RFC1P35251 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFC1P35251 TOP3BP1-201ENST00000420768 1380 ntBASIC17.77■□□□□ 0.43
RFC1P35251 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.77■□□□□ 0.43
RFC1P35251 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
RFC1P35251 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
RFC1P35251 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFC1P35251 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFC1P35251 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC1P35251 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC1P35251 LINC00895-201ENST00000629028 1637 ntBASIC17.76■□□□□ 0.43
RFC1P35251 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.76■□□□□ 0.43
RFC1P35251 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC1P35251 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC1P35251 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.76■□□□□ 0.43
RFC1P35251 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.76■□□□□ 0.43
RFC1P35251 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.76■□□□□ 0.43
RFC1P35251 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RFC1P35251 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC1P35251 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.76■□□□□ 0.43
RFC1P35251 MIR7706-201ENST00000613747 67 ntBASIC17.76■□□□□ 0.43
RFC1P35251 MIR1199-201ENST00000621445 119 ntBASIC17.76■□□□□ 0.43
RFC1P35251 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.76■□□□□ 0.43
RFC1P35251 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RFC1P35251 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC1P35251 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC1P35251 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC1P35251 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFC1P35251 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RFC1P35251 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.76■□□□□ 0.43
RFC1P35251 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.75■□□□□ 0.43
RFC1P35251 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFC1P35251 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.75■□□□□ 0.43
RFC1P35251 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC1P35251 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.75■□□□□ 0.43
RFC1P35251 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RFC1P35251 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.75■□□□□ 0.43
RFC1P35251 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RFC1P35251 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC1P35251 AL118508.1-201ENST00000613502 2345 ntBASIC17.75■□□□□ 0.43
RFC1P35251 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RFC1P35251 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.75■□□□□ 0.43
RFC1P35251 IGHV3-65-201ENST00000523210 341 ntBASIC17.75■□□□□ 0.43
RFC1P35251 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.75■□□□□ 0.43
RFC1P35251 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RFC1P35251 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC1P35251 GGTLC5P-201ENST00000617623 998 ntBASIC17.75■□□□□ 0.43
RFC1P35251 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.75■□□□□ 0.43
RFC1P35251 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
RFC1P35251 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC1P35251 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC1P35251 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RFC1P35251 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC1P35251 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.75■□□□□ 0.43
RFC1P35251 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RFC1P35251 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC1P35251 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFC1P35251 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms