Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ERCC2P18074 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ERCC2P18074 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.33■□□□□ 0.36
ERCC2P18074 SLC25A1P1-201ENST00000528351 927 ntBASIC17.33■□□□□ 0.36
ERCC2P18074 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.33■□□□□ 0.36
ERCC2P18074 AC120114.3-201ENST00000611923 658 ntBASIC17.33■□□□□ 0.36
ERCC2P18074 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.33■□□□□ 0.36
ERCC2P18074 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.33■□□□□ 0.36
ERCC2P18074 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ERCC2P18074 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ERCC2P18074 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ERCC2P18074 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ERCC2P18074 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ERCC2P18074 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.32■□□□□ 0.36
ERCC2P18074 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.32■□□□□ 0.36
ERCC2P18074 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.32■□□□□ 0.36
ERCC2P18074 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.32■□□□□ 0.36
ERCC2P18074 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.32■□□□□ 0.36
ERCC2P18074 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.32■□□□□ 0.36
ERCC2P18074 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.32■□□□□ 0.36
ERCC2P18074 AL139011.1-202ENST00000642063 584 ntBASIC17.32■□□□□ 0.36
ERCC2P18074 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.32■□□□□ 0.36
ERCC2P18074 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 AL671710.1-201ENST00000610245 2349 ntBASIC17.32■□□□□ 0.36
ERCC2P18074 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.32■□□□□ 0.36
ERCC2P18074 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.32■□□□□ 0.36
ERCC2P18074 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ERCC2P18074 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.32■□□□□ 0.36
ERCC2P18074 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ERCC2P18074 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ERCC2P18074 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.31■□□□□ 0.36
ERCC2P18074 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.31■□□□□ 0.36
ERCC2P18074 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.31■□□□□ 0.36
ERCC2P18074 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ERCC2P18074 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ERCC2P18074 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.31■□□□□ 0.36
ERCC2P18074 AC087641.1-201ENST00000557561 1021 ntBASIC17.31■□□□□ 0.36
ERCC2P18074 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 CYP2A7P1-201ENST00000595391 815 ntBASIC17.31■□□□□ 0.36
ERCC2P18074 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.31■□□□□ 0.36
ERCC2P18074 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.31■□□□□ 0.36
ERCC2P18074 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.31■□□□□ 0.36
ERCC2P18074 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.31■□□□□ 0.36
ERCC2P18074 AC006538.1-201ENST00000567905 1585 ntBASIC17.31■□□□□ 0.36
ERCC2P18074 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ERCC2P18074 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERCC2P18074 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ERCC2P18074 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.3■□□□□ 0.36
ERCC2P18074 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC2P18074 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC2P18074 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.3■□□□□ 0.36
ERCC2P18074 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC2P18074 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC2P18074 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC2P18074 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC2P18074 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ERCC2P18074 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.3■□□□□ 0.36
ERCC2P18074 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERCC2P18074 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms