Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.71■□□□□ 0.42
RARAP10276 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
RARAP10276 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RARAP10276 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RARAP10276 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.7■□□□□ 0.42
RARAP10276 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.7■□□□□ 0.42
RARAP10276 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.7■□□□□ 0.42
RARAP10276 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.7■□□□□ 0.42
RARAP10276 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.7■□□□□ 0.42
RARAP10276 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.7■□□□□ 0.42
RARAP10276 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.7■□□□□ 0.42
RARAP10276 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.7■□□□□ 0.42
RARAP10276 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.7■□□□□ 0.42
RARAP10276 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.7■□□□□ 0.42
RARAP10276 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.7■□□□□ 0.42
RARAP10276 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.7■□□□□ 0.42
RARAP10276 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RARAP10276 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.7■□□□□ 0.42
RARAP10276 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RARAP10276 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
RARAP10276 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.7■□□□□ 0.42
RARAP10276 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.7■□□□□ 0.42
RARAP10276 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RARAP10276 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARAP10276 AC006504.4-201ENST00000592118 1568 ntBASIC17.7■□□□□ 0.42
RARAP10276 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RARAP10276 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.69■□□□□ 0.42
RARAP10276 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
RARAP10276 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.69■□□□□ 0.42
RARAP10276 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RARAP10276 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RARAP10276 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 PTCHD3P3-201ENST00000403073 906 ntBASIC17.69■□□□□ 0.42
RARAP10276 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.69■□□□□ 0.42
RARAP10276 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.69■□□□□ 0.42
RARAP10276 PAWRP1-201ENST00000451083 565 ntBASIC17.69■□□□□ 0.42
RARAP10276 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.69■□□□□ 0.42
RARAP10276 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.69■□□□□ 0.42
RARAP10276 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.69■□□□□ 0.42
RARAP10276 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.69■□□□□ 0.42
RARAP10276 TP73-AS1-207ENST00000624167 988 ntBASIC17.69■□□□□ 0.42
RARAP10276 AC107918.4-202ENST00000641623 219 ntBASIC17.69■□□□□ 0.42
RARAP10276 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RARAP10276 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.69■□□□□ 0.42
RARAP10276 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RARAP10276 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RARAP10276 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.69■□□□□ 0.42
RARAP10276 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
RARAP10276 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 AL021920.2-201ENST00000624828 1351 ntBASIC17.68■□□□□ 0.42
RARAP10276 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.68■□□□□ 0.42
RARAP10276 OR6D1P-203ENST00000641209 4860 ntBASIC17.68■□□□□ 0.42
RARAP10276 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RARAP10276 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.68■□□□□ 0.42
RARAP10276 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.68■□□□□ 0.42
RARAP10276 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.68■□□□□ 0.42
RARAP10276 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.68■□□□□ 0.42
RARAP10276 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.68■□□□□ 0.42
RARAP10276 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.68■□□□□ 0.42
RARAP10276 ELK2BP-201ENST00000415014 1224 ntBASIC17.68■□□□□ 0.42
RARAP10276 LAGE3P1-201ENST00000425356 484 ntBASIC17.68■□□□□ 0.42
RARAP10276 RPS2P1-201ENST00000434010 821 ntBASIC17.68■□□□□ 0.42
RARAP10276 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.68■□□□□ 0.42
RARAP10276 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms